RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 ASRGL1Q7L266 308 aa13.2□□□□□ -0.3
VCX3A-201ENST00000381089 VMO1Q7Z5L0 202 aa13.2□□□□□ -0.3
VCX3A-201ENST00000381089 NAA40Q86UY6 237 aa13.2□□□□□ -0.3
VCX3A-201ENST00000381089 DHFR2Q86XF0 187 aa13.2□□□□□ -0.3
VCX3A-201ENST00000381089 PDZD9Q8IXQ8 264 aa13.2□□□□□ -0.3
VCX3A-201ENST00000381089 GALNT4Q8N4A0 578 aa13.2□□□□□ -0.3
VCX3A-201ENST00000381089 FAM86B1Q8N7N1 296 aa13.2□□□□□ -0.3
VCX3A-201ENST00000381089 OR4C15Q8NGM1 316 aa13.2□□□□□ -0.3
VCX3A-201ENST00000381089 RASSF4Q9H2L5 321 aa13.2□□□□□ -0.3
VCX3A-201ENST00000381089 OPA3Q9H6K4 179 aa13.2□□□□□ -0.3
VCX3A-201ENST00000381089 ONECUT1Q9UBC0 465 aa13.2□□□□□ -0.3
VCX3A-201ENST00000381089 KAAG1Q9UBP8 84 aa13.2□□□□□ -0.3
VCX3A-201ENST00000381089 RPUSD1Q9UJJ7 312 aaKnown RBP13.2□□□□□ -0.3
VCX3A-201ENST00000381089 VPREB3Q9UKI3 123 aa13.2□□□□□ -0.3
VCX3A-201ENST00000381089 ZNF281Q9Y2X9 895 aa13.2□□□□□ -0.3
VCX3A-201ENST00000381089 BHLHE40O14503 412 aa13.19□□□□□ -0.3
VCX3A-201ENST00000381089 ARPC3O15145 178 aa13.19□□□□□ -0.3
VCX3A-201ENST00000381089 FXYD6P3P58550 94 aa13.19□□□□□ -0.3
VCX3A-201ENST00000381089 HOXA4Q00056 320 aaPredicted RBP13.19□□□□□ -0.3
VCX3A-201ENST00000381089 TRIM25Q14258 630 aaKnown RBP13.19□□□□□ -0.3
VCX3A-201ENST00000381089 MICBQ29980 383 aa13.19□□□□□ -0.3
VCX3A-201ENST00000381089 RFX4Q33E94 735 aa13.19□□□□□ -0.3
VCX3A-201ENST00000381089 SLC36A1Q7Z2H8 476 aa13.19□□□□□ -0.3
VCX3A-201ENST00000381089 ZBTB46Q86UZ6 589 aa13.19□□□□□ -0.3
VCX3A-201ENST00000381089 FAM90A1Q86YD7 464 aa13.19□□□□□ -0.3
VCX3A-201ENST00000381089 OR4K13Q8NH42 304 aa13.19□□□□□ -0.3
VCX3A-201ENST00000381089 ASB9Q96DX5 294 aa13.19□□□□□ -0.3
VCX3A-201ENST00000381089 DMRTB1Q96MA1 342 aa13.19□□□□□ -0.3
VCX3A-201ENST00000381089 IFT27Q9BW83 186 aa13.19□□□□□ -0.3
VCX3A-201ENST00000381089 PNRC2Q9NPJ4 139 aaKnown RBP13.19□□□□□ -0.3
VCX3A-201ENST00000381089 ACTR3BQ9P1U1 418 aa13.19□□□□□ -0.3
VCX3A-201ENST00000381089 TRBV4-1A0A0J9YWV2 114 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 ANKRD61A6NGH8 418 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 GPR37O15354 613 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 TSPAN9O75954 239 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 PAHP00439 452 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 HIST1H1CP16403 213 aaKnown RBP13.18□□□□□ -0.3
VCX3A-201ENST00000381089 SMIM11AP58511 58 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 ZNF92Q03936 586 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 FLOT2Q14254 428 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 FBLN7Q53RD9 439 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 TEX36Q5VZQ5 186 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 METAP1DQ6UB28 335 aaPredicted RBP13.18□□□□□ -0.3
VCX3A-201ENST00000381089 DRAM2Q6UX65 266 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 GCSAMQ8N6F7 178 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 OR8S1Q8NH09 359 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 OR52J3Q8NH60 311 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 OR5R1Q8NH85 324 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 LRGUKQ96M69 825 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 OR52D1Q9H346 318 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 MUC13Q9H3R2 512 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 GORASP2Q9H8Y8 452 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 DCAF13Q9NV06 445 aaKnown RBP13.18□□□□□ -0.3
VCX3A-201ENST00000381089 NDUFAF4Q9P032 175 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 ZNRD1Q9P1U0 126 aa13.18□□□□□ -0.3
VCX3A-201ENST00000381089 SAMD4AQ9UPU9 718 aaKnown RBP13.18□□□□□ -0.3
VCX3A-201ENST00000381089 ZNF816-ZNF321PA0A0X1KG74 233 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 ANKRD30BLA7E2S9 258 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 ACOT8O14734 319 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 IDH3BO43837 385 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 MUC1P15941 1255 aaPredicted RBP13.17□□□□□ -0.3
VCX3A-201ENST00000381089 IFNGR2P38484 337 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 DDOSTP39656 456 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 EGR3Q06889 387 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 SEC23BQ15437 767 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 SNAI3Q3KNW1 292 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 GLYATL3Q5SZD4 288 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 LCN8Q6JVE9 175 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 ZNF826PQ6ZT77 177 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 Q6ZTK2 550 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 LNX2Q8N448 690 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 OR2AE1Q8NHA4 323 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 UTP4Q969X6 686 aaKnown RBP13.17□□□□□ -0.3
VCX3A-201ENST00000381089 MAP6Q96JE9 813 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 COPS4Q9BT78 406 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 RNPEPL1Q9HAU8 725 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 POMPQ9Y244 141 aa13.17□□□□□ -0.3
VCX3A-201ENST00000381089 TET2Q6N021 2002 aaPredicted RBP13.17□□□□□ -0.3
VCX3A-201ENST00000381089 IGHV3OR15-7A0A075B7D8 119 aa13.16□□□□□ -0.3
VCX3A-201ENST00000381089 XRCC2O43543 280 aa13.16□□□□□ -0.3
VCX3A-201ENST00000381089 NDUFB3O43676 98 aa13.16□□□□□ -0.3
VCX3A-201ENST00000381089 CIB2O75838 187 aa13.16□□□□□ -0.3
VCX3A-201ENST00000381089 LHBP01229 141 aa13.16□□□□□ -0.3
VCX3A-201ENST00000381089 TAF13Q15543 124 aa13.16□□□□□ -0.3
VCX3A-201ENST00000381089 C1orf146Q5VVC0 180 aa13.16□□□□□ -0.3
VCX3A-201ENST00000381089 SPATA24Q86W54 205 aa13.16□□□□□ -0.3
VCX3A-201ENST00000381089 SDR9C7Q8NEX9 313 aa13.16□□□□□ -0.3
VCX3A-201ENST00000381089 PROKR2Q8NFJ6 384 aa13.16□□□□□ -0.3
VCX3A-201ENST00000381089 OR56B2PQ8NGI1 322 aa13.16□□□□□ -0.3
VCX3A-201ENST00000381089 FN3KQ9H479 309 aa13.16□□□□□ -0.3
VCX3A-201ENST00000381089 TCRBV5S2A0A599 114 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 OR6C68A6NDL8 312 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 ANKRD65E5RJM6 399 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 NPFFO15130 113 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 TIPRLO75663 272 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 GABRA5P31644 462 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 NAA10P41227 235 aaPredicted RBP13.15□□□□□ -0.3
VCX3A-201ENST00000381089 POU4F2Q12837 409 aa13.15□□□□□ -0.3
VCX3A-201ENST00000381089 LRRC10Q5BKY1 277 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms