RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 TUSC3Q13454 348 aa8.38□□□□□ -1.07
PTPRA-204ENST00000380393 ALG10BQ5I7T1 473 aa8.38□□□□□ -1.07
PTPRA-204ENST00000380393 STPG1Q5TH74 334 aa8.38□□□□□ -1.07
PTPRA-204ENST00000380393 FRG2Q64ET8 278 aa8.38□□□□□ -1.07
PTPRA-204ENST00000380393 ZNF66Q6ZN08 573 aa8.38□□□□□ -1.07
PTPRA-204ENST00000380393 DNAJA3Q96EY1 480 aa8.38□□□□□ -1.07
PTPRA-204ENST00000380393 MS4A10Q96PG2 267 aa8.38□□□□□ -1.07
PTPRA-204ENST00000380393 FRG2BQ96QU4 278 aa8.38□□□□□ -1.07
PTPRA-204ENST00000380393 ZNF607Q96SK3 696 aa8.38□□□□□ -1.07
PTPRA-204ENST00000380393 CCDC3Q9BQI4 270 aa8.38□□□□□ -1.07
PTPRA-204ENST00000380393 ANGPTL4Q9BY76 406 aa8.38□□□□□ -1.07
PTPRA-204ENST00000380393 TNRC18O15417 2968 aaPredicted RBP8.38□□□□□ -1.07
PTPRA-204ENST00000380393 TICRRQ7Z2Z1 1910 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 OR4C45A6NMZ5 311 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 SLC2A10O95528 541 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 PDGFBP01127 241 aaPredicted RBP8.37□□□□□ -1.07
PTPRA-204ENST00000380393 CSN2P05814 226 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 PSG1P11464 419 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 TACR2P21452 398 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 HIST1H3AP68431 136 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 DEFB103AP81534 67 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 PPP1R1AQ13522 171 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 UPP1Q16831 310 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 LYG2Q86SG7 212 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 TEX26Q8N6G2 289 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 NOXO1Q8NFA2 376 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 NEIL2Q969S2 332 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 TVP23CQ96ET8 276 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 TIMP4Q99727 224 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 CMKLR1Q99788 373 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 TTTY10Q9BZA0 68 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 SLC32A1Q9H598 525 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 CDH20Q9HBT6 801 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 FBXO34Q9NWN3 711 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 MEMO1Q9Y316 297 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 TSC2P49815 1807 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 TLCD2A6NGC4 264 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 FTCDNL1E5RQL4 147 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 F5H5T6 163 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 EOMESO95936 686 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 MRPL3P09001 348 aaKnown RBP8.37□□□□□ -1.07
PTPRA-204ENST00000380393 EPORP19235 508 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 PPICP45877 212 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 RBPJQ06330 500 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 IER5LQ5T953 404 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 CD300LDQ6UXZ3 194 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 ZNF429Q86V71 674 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 MIB2Q96AX9 1013 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 APH1AQ96BI3 265 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 ANKRD9Q96BM1 317 aaPredicted RBP8.37□□□□□ -1.07
PTPRA-204ENST00000380393 CTHRC1Q96CG8 243 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 RARRES2Q99969 163 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 ZNF319Q9P2F9 582 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 ADAM29Q9UKF5 820 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 TBX19O60806 448 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 DUS4LO95620 317 aaKnown RBP8.37□□□□□ -1.07
PTPRA-204ENST00000380393 IRF1P10914 325 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 CRYBA4P53673 196 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 PCBP3P57721 371 aaKnown RBP8.37□□□□□ -1.07
PTPRA-204ENST00000380393 SNAI3Q3KNW1 292 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 TMEM205Q6UW68 189 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 FAM219AQ8IW50 185 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 ZNF775Q96BV0 537 aaPredicted RBP8.37□□□□□ -1.07
PTPRA-204ENST00000380393 ZNF479Q96JC4 524 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 AIF1LQ9BQI0 150 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 NIPSNAP3BQ9BS92 247 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 ALG12Q9BV10 488 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 MS4A8Q9BY19 250 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 HINT3Q9NQE9 182 aaKnown RBP8.37□□□□□ -1.07
PTPRA-204ENST00000380393 VPS29Q9UBQ0 182 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 KCNK6Q9Y257 313 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 LAMTOR2Q9Y2Q5 125 aa8.37□□□□□ -1.07
PTPRA-204ENST00000380393 MED19A0JLT2 244 aaPredicted RBP8.36□□□□□ -1.07
PTPRA-204ENST00000380393 CR2P20023 1033 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 BMP5P22003 454 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 TAS2R41P59536 307 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 RPS13P62277 151 aaKnown RBP8.36□□□□□ -1.07
PTPRA-204ENST00000380393 TGM3Q08188 693 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 HIKESHIQ53FT3 197 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 ENTPD8Q5MY95 495 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 BHLHE23Q8NDY6 225 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 GPR32P1Q8NGA4 272 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 MOAP1Q96BY2 351 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 IL17FQ96PD4 163 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 CABLES2Q9BTV7 478 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 SMIM3Q9BZL3 60 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 TBX21Q9UL17 535 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 ZFP37Q9Y6Q3 630 aaPredicted RBP8.36□□□□□ -1.07
PTPRA-204ENST00000380393 DOCK8Q8NF50 2099 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 RALGAPA2Q2PPJ7 1873 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 TRAV26-1A0A087WT03 109 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 CDHR4A6H8M9 788 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 RNF212BA8MTL3 300 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 EIF1AYO14602 144 aaKnown RBP8.36□□□□□ -1.07
PTPRA-204ENST00000380393 GALR2O43603 387 aaPredicted RBP8.36□□□□□ -1.07
PTPRA-204ENST00000380393 CTAG2O75638 210 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 ARAFP10398 606 aa8.36□□□□□ -1.07
PTPRA-204ENST00000380393 EIF1AXP47813 144 aaKnown RBP8.36□□□□□ -1.07
PTPRA-204ENST00000380393 EIF2B1Q14232 305 aaKnown RBP8.36□□□□□ -1.07
PTPRA-204ENST00000380393 GAS6Q14393 721 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms