RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 SERPINE2P07093 398 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 FAM157BP0CG42 384 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 LIFP15018 202 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 ZNF32P17041 273 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 ARR3P36575 388 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 RAB1AP62820 205 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 FAM76BQ5HYJ3 339 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 RNLSQ5VYX0 342 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 OR51F2Q8NH61 342 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 CD300LFQ8TDQ1 290 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 NUDCD2Q8WVJ2 157 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 ASB10Q8WXI3 467 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 AUNIPQ9H7T9 357 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 B3GNT2Q9NY97 397 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 KLK11Q9UBX7 282 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 MDC1Q14676 2089 aaKnown RBP12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 DOCK9Q9BZ29 2069 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 RAC2P15153 192 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 ZNF14P17017 642 aaPredicted RBP12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 ANXA7P20073 488 aaKnown RBP12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 OR1F12Q8NHA8 337 aa12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 MRPS18AQ9NVS2 196 aaKnown RBP12.64□□□□□ -0.39
SHROOM1-203ENST00000378679 COL6A6A6NMZ7 2263 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 PMP2P02689 132 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 LPLP06858 475 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 ASAH2BP0C7U1 165 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 IL2RGP31785 369 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 GABRA2P47869 451 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 PLPPR5Q32ZL2 321 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 ZC3HAV1LQ96H79 300 aaKnown RBP12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 MAGEA5P43359 124 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 MZT1Q08AG7 82 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 UPRTQ96BW1 309 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 ZNF285Q96NJ3 590 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 PRRX2Q99811 253 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 ADAM19Q9H013 955 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 DYNLRB1Q9NP97 96 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 SNAPC5O75971 98 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 HLA-HP01893 362 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 ZNF774Q6NX45 483 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 STOML3Q8TAV4 291 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 FAM131CQ96AQ9 280 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 BCO1Q9HAY6 547 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 SDHAF2Q9NX18 166 aa12.63□□□□□ -0.39
SHROOM1-203ENST00000378679 PMS2P1A4D2B8 440 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 DCTN6O00399 190 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 CYC1P08574 325 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 FTH1P19P0C7X4 201 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 SELENOPP49908 381 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 ACTBL2Q562R1 376 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 FAM74A1Q5RGS3 127 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 ANKRD16Q6P6B7 361 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 SLC25A21Q9BQT8 299 aaPredicted RBP12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 CCDC86Q9H6F5 360 aaKnown RBP12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 GPR160Q9UJ42 338 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 TRAPPC2LQ9UL33 140 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 PROCRQ9UNN8 238 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 IGHV1-45A0A0A0MS14 117 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 OGG1O15527 345 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 CD96P40200 585 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 ZNF695Q8IW36 515 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 APCDD1LQ8NCL9 501 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 PAQR8Q8TEZ7 354 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 FBLIM1Q8WUP2 373 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 S100PBPQ96BU1 408 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 C20orf85Q9H1P6 137 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 NGBQ9NPG2 151 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 TAS2R5Q9NYW4 299 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 PLEKHB1Q9UF11 243 aaPredicted RBP12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 LSM5Q9Y4Y9 91 aaKnown RBP12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 XRCC2O43543 280 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 WNT11O96014 354 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 THY1P04216 161 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 DCTDP32321 178 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 RFX2P48378 723 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 CFHR1Q03591 330 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 GK2Q14410 553 aaPredicted RBP12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 C3AR1Q16581 482 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 MAMSTRQ6ZN01 415 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 OR2AE1Q8NHA4 323 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 VRK1Q99986 396 aaPredicted RBP12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 BARHL1Q9BZE3 327 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 MS4A7Q9GZW8 240 aaPredicted RBP12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 FRRS1LQ9P0K9 344 aa12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 MRPS18BQ9Y676 258 aaKnown RBP12.62□□□□□ -0.39
SHROOM1-203ENST00000378679 IGKV3D-11A0A0A0MRZ8 115 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 ANGPTL7O43827 346 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 IL11P20809 199 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 HOXA6P31267 233 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 AGFG1P52594 562 aaKnown RBP12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 RAP2BP61225 183 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 INSM1Q01101 510 aaPredicted RBP12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 RBM39Q14498 530 aaKnown RBP12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 SLC25A26Q70HW3 274 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 CHAC2Q8WUX2 184 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 UFSP2Q9NUQ7 469 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 THADAQ6YHU6 1953 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 A0A0A6YYH2 397 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 A6NJ64 397 aa12.61□□□□□ -0.39
SHROOM1-203ENST00000378679 DXOO77932 396 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms