RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 NR0B2Q15466 257 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ADOQ96SZ5 270 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 PPP1R17O96001 155 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 PKIAP61925 76 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 RPS4XP62701 263 aaKnown RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 TUSC1Q2TAM9 212 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 CLIP3Q96DZ5 547 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 SCLYQ96I15 445 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 COL22A1Q8NFW1 1626 aaPredicted RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 MARF1Q9Y4F3 1742 aaKnown RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 SELENOFO60613 162 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 DBHP09172 617 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 GNG3P63215 75 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 GPNMBQ14956 572 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 SMIM15Q7Z3B0 74 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 CAPN10Q9HC96 672 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF142P52746 1687 aaPredicted RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 KISS1Q15726 138 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 NKG7Q16617 165 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 PDZD11Q5EBL8 140 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 FFAR4Q5NUL3 377 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 TNFRSF12AQ9NP84 129 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ACAA2P42765 397 aaKnown RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 YBX1P67809 324 aaKnown RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 HTD2P86397 168 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 SSPNQ14714 243 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 OR1S1Q8NH92 325 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 RNF186Q9NXI6 227 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 SNU13P55769 128 aaKnown RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 USF2Q15853 346 aaPredicted RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 RASL11AQ6T310 242 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 A0A1W2PPC4 97 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 IGHMP01871 453 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 LRIT1Q9P2V4 623 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 TCFL5Q9UL49 500 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 A0A1W2PNV4 684 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 GREM1O60565 184 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ONECUT2O95948 504 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 STAG3L2P0CL84 134 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ATPAF1Q5TC12 328 aaPredicted RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 TMED6Q8WW62 240 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 AUTS2Q8WXX7 1259 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 DDOQ99489 341 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 METTL12A8MUP2 240 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 FOSL2P15408 326 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 RND3P61587 244 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF616Q08AN1 781 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF813Q6ZN06 617 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 OR2M7Q8NG81 312 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF814B7Z6K7 855 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 HPP00738 406 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 FAM166AQ6J272 317 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ASCL5Q7RTU5 278 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 SLC45A2Q9UMX9 530 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 PRSS21Q9Y6M0 314 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 DHHO43323 396 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 EPHA2P29317 976 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 OLIG2Q13516 323 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF791Q3KP31 576 aaPredicted RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 RAB6CQ53S08 254 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 DAZAP1Q96EP5 407 aaKnown RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 RAB6CQ9H0N0 254 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 MRPS2Q9Y399 296 aaKnown RBP4.43□□□□□ -1.7
PCDH9-201ENST00000377861 OR4Q3Q8NH05 313 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 LOXL4Q96JB6 756 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 S1PR3Q99500 378 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 OR6C3Q9NZP0 311 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 KLK11Q9UBX7 282 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 TBC1D29Q9UFV1 150 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 EMC9Q9Y3B6 208 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 ALS2Q96Q42 1657 aa4.43□□□□□ -1.7
PCDH9-201ENST00000377861 M0R143 59 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 OR2G3Q8NGZ4 309 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 OSGIN2Q9Y236 505 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 RPS10-NUDT3A0A1W2PQS6 291 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 SNCGO76070 127 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 D2HGDHQ8N465 521 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 F8VVB4 439 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 F8VWA3 439 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 TOX4O94842 621 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 BMI1P35226 326 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 TIMM9Q9Y5J7 89 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 NXPH2O95156 264 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 CASP6P55212 293 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 OR51M1Q9H341 326 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 H7BYZ3 331 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 C16orf52Q8NHV5 167 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 OR5V1Q9UGF6 321 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 KNG1P01042 644 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 CASTOR1Q8WTX7 329 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 Q9N2K0 584 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 FBXW5Q969U6 566 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 ELNP15502 786 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 RPS2P15880 293 aaKnown RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 IDH3GP51553 393 aaPredicted RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 MYEF2Q9P2K5 600 aaKnown RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 ZNF343Q6P1L6 599 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 MUC20Q8N307 709 aaPredicted RBP4.42□□□□□ -1.7
PCDH9-201ENST00000377861 OR2C3Q8N628 320 aa4.42□□□□□ -1.7
PCDH9-201ENST00000377861 OR10A7Q8NGE5 316 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms