RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 KCNJ8Q15842 424 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 KRTAP24-1Q3LI83 254 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 KDM4DQ6B0I6 523 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 KCTD18Q6PI47 426 aaPredicted RBP14.1□□□□□ -0.15
HMGN4-201ENST00000377575 LRRN1Q6UXK5 716 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 C1orf229Q6ZS94 237 aaPredicted RBP14.1□□□□□ -0.15
HMGN4-201ENST00000377575 AMIGO2Q86SJ2 522 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 CSNK2A3Q8NEV1 391 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 OR8B3Q8NGG8 313 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 NANPQ8TBE9 248 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 LRTOMTQ8WZ04 291 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 SGK3Q96BR1 496 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 OR8B2Q96RD0 313 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 TMEM246Q9BRR3 403 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 TMEM165Q9HC07 324 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 RNF7Q9UBF6 113 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 ZNF391Q9UJN7 358 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 TMEM14AQ9Y6G1 99 aa14.1□□□□□ -0.15
HMGN4-201ENST00000377575 A0A0A6YYJ9 748 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 CCDC182A6NF36 153 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 A6NLC8 198 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 ZAR1LA6NP61 321 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 PRKYO43930 277 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 MITFO75030 526 aaPredicted RBP14.09□□□□□ -0.15
HMGN4-201ENST00000377575 ALOX5APP20292 161 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 GNALP38405 381 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 GSK3AP49840 483 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 GNB2P62879 340 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 SLX4IPQ5VYV7 408 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 DCDC5Q6ZRR9 648 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 CCDC121Q6ZUS5 278 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 KRT77Q7Z794 578 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 ZNF418Q8TF45 676 aaPredicted RBP14.09□□□□□ -0.15
HMGN4-201ENST00000377575 NEIL1Q96FI4 390 aaPredicted RBP14.09□□□□□ -0.15
HMGN4-201ENST00000377575 CENPNQ96H22 339 aaPredicted RBP14.09□□□□□ -0.15
HMGN4-201ENST00000377575 CNN2Q99439 309 aaKnown RBP14.09□□□□□ -0.15
HMGN4-201ENST00000377575 TEAD3Q99594 435 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 MRI1Q9BV20 369 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 TRIM36Q9NQ86 728 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 H2AFY2Q9P0M6 372 aaPredicted RBP14.09□□□□□ -0.15
HMGN4-201ENST00000377575 KLHDC2Q9Y2U9 406 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 LRP12Q9Y561 859 aa14.09□□□□□ -0.15
HMGN4-201ENST00000377575 SLC22A31A6NKX4 558 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 MRPL3P09001 348 aaKnown RBP14.08□□□□□ -0.16
HMGN4-201ENST00000377575 WNT2P09544 360 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 ZNF12P17014 697 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 ADRA2CP18825 462 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 ZNF154Q13106 437 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 OR8B8Q15620 311 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 FAM201AQ5SY85 155 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 NXNL2Q5VZ03 156 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 C12orf73Q69YU5 71 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 DEGS2Q6QHC5 323 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 ASRGL1Q7L266 308 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 DEFB108BQ8NET1 73 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 TMEM163Q8TC26 289 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 ASB17Q8WXJ9 295 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 C19orf24Q9BVV8 132 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 PAPOLGQ9BWT3 736 aaKnown RBP14.08□□□□□ -0.16
HMGN4-201ENST00000377575 MROQ9BYG7 248 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 ABCB9Q9NP78 766 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 MMP26Q9NRE1 261 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 C1orf123Q9NWV4 160 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 OAZ3Q9UMX2 235 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 INSIG2Q9Y5U4 225 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 STAB1Q9NY15 2570 aa14.08□□□□□ -0.16
HMGN4-201ENST00000377575 hCG_1807616A0A1W2PRN6 198 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 ANXA2P2A6NMY6 339 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 TRAPPC2LH3BP13 241 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 GRPP07492 148 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 PITPNBP48739 271 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 SRSF2Q01130 221 aaKnown RBP14.07□□□□□ -0.16
HMGN4-201ENST00000377575 ARMCX4Q5H9R4 360 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 BTNL3Q6UXE8 466 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 MEPCEQ7L2J0 689 aaKnown RBP14.07□□□□□ -0.16
HMGN4-201ENST00000377575 GID4Q8IVV7 300 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 TCEANCQ8N8B7 351 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 OR8B12Q8NGG6 310 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 CIB1Q99828 191 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 OSBPL10Q9BXB5 764 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 SEMA6AQ9H2E6 1030 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 ZNF319Q9P2F9 582 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 CLN8Q9UBY8 286 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 OPN4Q9UHM6 478 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 AUP1Q9Y679 476 aa14.07□□□□□ -0.16
HMGN4-201ENST00000377575 TRAV38-1A0A0B4J264 116 aa14.06□□□□□ -0.16
HMGN4-201ENST00000377575 ACOD1A6NK06 481 aa14.06□□□□□ -0.16
HMGN4-201ENST00000377575 M0R129 80 aa14.06□□□□□ -0.16
HMGN4-201ENST00000377575 LGALS8O00214 317 aa14.06□□□□□ -0.16
HMGN4-201ENST00000377575 PHYHO14832 338 aa14.06□□□□□ -0.16
HMGN4-201ENST00000377575 ZNF254O75437 659 aa14.06□□□□□ -0.16
HMGN4-201ENST00000377575 EPHA2P29317 976 aa14.06□□□□□ -0.16
HMGN4-201ENST00000377575 HCCSP53701 268 aa14.06□□□□□ -0.16
HMGN4-201ENST00000377575 IL5RAQ01344 420 aa14.06□□□□□ -0.16
HMGN4-201ENST00000377575 ZNF829Q3KNS6 432 aaPredicted RBP14.06□□□□□ -0.16
HMGN4-201ENST00000377575 USP43Q70EL4 1123 aa14.06□□□□□ -0.16
HMGN4-201ENST00000377575 BPIFB2Q8N4F0 458 aa14.06□□□□□ -0.16
HMGN4-201ENST00000377575 BOLLQ8N9W6 283 aaKnown RBP14.06□□□□□ -0.16
HMGN4-201ENST00000377575 MNTQ99583 582 aa14.06□□□□□ -0.16
HMGN4-201ENST00000377575 MICU1Q9BPX6 476 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms