RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 TMPRSS5Q9H3S3 457 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 NDUFB11Q9NX14 153 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 MMP17Q9ULZ9 603 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 PTBP3O95758 552 aaKnown RBP12.38□□□□□ -0.43
COL4A1-201ENST00000375820 PCBP4P57723 403 aaKnown RBP12.38□□□□□ -0.43
COL4A1-201ENST00000375820 DUSP8Q13202 625 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 SELENBP1Q13228 472 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 TCTN1Q2MV58 587 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 WDR31Q8NA23 367 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 ZNF596Q8TC21 504 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 IGLV3-10A0A075B6K4 115 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 ZNF83P51522 516 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 XKR7Q5GH72 579 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 RGS7BPQ6MZT1 257 aaPredicted RBP12.38□□□□□ -0.43
COL4A1-201ENST00000375820 BCL7CQ8WUZ0 217 aaPredicted RBP12.38□□□□□ -0.43
COL4A1-201ENST00000375820 UBE2ZQ9H832 354 aaPredicted RBP12.38□□□□□ -0.43
COL4A1-201ENST00000375820 IGHV3-43A0A0B4J1X8 118 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 JTBO76095 146 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 IGHV3-43DP0DP04 118 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 AFMIDQ63HM1 303 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 LFNGQ8NES3 379 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 OR52N4Q8NGI2 321 aa12.38□□□□□ -0.43
COL4A1-201ENST00000375820 HMX2A2RU54 273 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 J3KRW8 73 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 WIPI1Q5MNZ9 446 aaPredicted RBP12.37□□□□□ -0.43
COL4A1-201ENST00000375820 DLL4Q9NR61 685 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 SAGE1Q9NXZ1 904 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 KRASP01116 189 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 MGMTP16455 207 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 NCR3LG1Q68D85 454 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 S1PR5Q9H228 398 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 DOK5Q9P104 306 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 LAMP3Q9UQV4 416 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 KCNE3Q9Y6H6 103 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 NPEPL1Q8NDH3 523 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 KISS1RQ969F8 398 aaPredicted RBP12.37□□□□□ -0.43
COL4A1-201ENST00000375820 TXNIPQ9H3M7 391 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 ZDHHC11Q9H8X9 412 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 TRAPPC4Q9Y296 219 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 TMEM129A0AVI4 362 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 GYPAP02724 150 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 CTXN2P0C2S0 81 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 SULT1A3P0DMM9 295 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 SULT1A4P0DMN0 295 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 METAP1P53582 386 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 DHRS4L2Q6PKH6 230 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 Q6ZS52 159 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 LSRQ86X29 649 aaPredicted RBP12.37□□□□□ -0.43
COL4A1-201ENST00000375820 OSR2Q8N2R0 312 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 OR11G2Q8NGC1 345 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 A0A1W2PNV4 684 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 F5H697 171 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 DSCR3O14972 297 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 KLK10O43240 276 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 EPHA2P29317 976 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 DIO1P49895 249 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 LIMK1P53667 647 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 SLC17A1Q14916 467 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 CAMKMTQ7Z624 323 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 TDHQ8IZJ6 230 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 CORO2AQ92828 525 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 TRIM77I1YAP6 450 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 AMTP48728 403 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 CEACAM16Q2WEN9 425 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 ELFN2Q5R3F8 820 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 FGF14Q92915 247 aa12.37□□□□□ -0.43
COL4A1-201ENST00000375820 TARM1B6A8C7 271 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 C2CD4DB7Z1M9 353 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 INSL4Q14641 139 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 WDR88Q6ZMY6 472 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 GALMQ96C23 342 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 WDR89Q96FK6 387 aaPredicted RBP12.36□□□□□ -0.43
COL4A1-201ENST00000375820 SPNS1Q9H2V7 528 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 C20orf141Q9NUB4 165 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 PMS2P1A4D2B8 440 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 C1QBP02746 253 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 OTUD1Q5VV17 481 aaPredicted RBP12.36□□□□□ -0.43
COL4A1-201ENST00000375820 C17orf78Q8N4C9 275 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 ADPRHL1Q8NDY3 354 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 JAM3Q9BX67 310 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 BMPR1BO00238 502 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 OR2T2Q6IF00 324 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 KIRREL2Q6UWL6 708 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 PPP1R1CQ8WVI7 109 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 KTI12Q96EK9 354 aaPredicted RBP12.36□□□□□ -0.43
COL4A1-201ENST00000375820 ADGRG7Q96K78 797 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 TAAR6Q96RI8 345 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 IFITM5A6NNB3 132 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 HTN1P15515 57 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 ZBTB25P24278 435 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 FER1L6Q2WGJ9 1857 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 RFESDQ8TAC1 157 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 M1APQ8TC57 530 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 SARAFQ96BY9 339 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 FSCN3Q9NQT6 498 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 ZNF586Q9NXT0 402 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 ZAR1LA6NP61 321 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 AVPR2P30518 371 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 ARRB2P32121 409 aa12.36□□□□□ -0.43
COL4A1-201ENST00000375820 NOVP48745 357 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms