RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 AQP7P3A6NL99 342 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 RFPL4AA6NLU0 287 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 ZNF726A6NNF4 738 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 RFPL4AL1F8VTS6 287 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 ZNF806P0C7X5 589 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 ZNF239Q16600 458 aaKnown RBP12.36□□□□□ -0.43
MSH5-202ENST00000375740 PCGF3Q3KNV8 242 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 SVBPQ8N300 66 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 GTPBP8Q8N3Z3 284 aaPredicted RBP12.36□□□□□ -0.43
MSH5-202ENST00000375740 JAGN1Q8N5M9 183 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 TMEM156Q8N614 296 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 DVL3Q92997 716 aaPredicted RBP12.36□□□□□ -0.43
MSH5-202ENST00000375740 JSRP1Q96MG2 331 aaPredicted RBP12.36□□□□□ -0.43
MSH5-202ENST00000375740 GAL3ST1Q99999 423 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 PBOV1Q9GZY1 135 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 NIT2Q9NQR4 276 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 ASF1BQ9NVP2 202 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 MYEF2Q9P2K5 600 aaKnown RBP12.36□□□□□ -0.43
MSH5-202ENST00000375740 FRYLO94915 3013 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 A0A087WZY1 265 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 ACTL6AO96019 429 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 QDPRP09417 244 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 DHRS7BQ6IAN0 325 aaPredicted RBP12.36□□□□□ -0.43
MSH5-202ENST00000375740 TCEAL6Q6IPX3 200 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 OR51S1Q8NGJ8 323 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 OR2AJ1Q8NGZ0 328 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 TCEAL3Q969E4 200 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 ZNF471Q9BX82 626 aaPredicted RBP12.36□□□□□ -0.43
MSH5-202ENST00000375740 POLR1DQ9Y2S0 133 aa12.36□□□□□ -0.43
MSH5-202ENST00000375740 SNAPC5O75971 98 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 UBBP0CG47 229 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 LIFP15018 202 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 PRSS3P35030 304 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 MLF1P58340 268 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 RPS27AP62979 156 aaKnown RBP12.35□□□□□ -0.43
MSH5-202ENST00000375740 UBA52P62987 128 aaKnown RBP12.35□□□□□ -0.43
MSH5-202ENST00000375740 C4orf46Q504U0 113 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 PAQR8Q8TEZ7 354 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 EDARADDQ8WWZ3 215 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 CFAP54Q96N23 3096 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 LOC102725191A0A1B0GVB3 256 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 SSX5O60225 188 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 ZIC3O60481 467 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 EIF1BO60739 113 aaKnown RBP12.35□□□□□ -0.43
MSH5-202ENST00000375740 CLDN17P56750 224 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 BLOC1S1P78537 153 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 HIST3H3Q16695 136 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 ZNF468Q5VIY5 522 aaPredicted RBP12.35□□□□□ -0.43
MSH5-202ENST00000375740 TMEM105Q8N8V8 129 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 SH2D2AQ9NP31 389 aa12.35□□□□□ -0.43
MSH5-202ENST00000375740 ACP1P24666 158 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 DSCR4P56555 118 aaPredicted RBP12.34□□□□□ -0.43
MSH5-202ENST00000375740 RPS18P62269 152 aaKnown RBP12.34□□□□□ -0.43
MSH5-202ENST00000375740 RAET1LQ5VY80 246 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 OR10K2Q6IF99 312 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 H3F3CQ6NXT2 135 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 LYPD6Q86Y78 171 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 DMBX1Q8NFW5 382 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 OR8S1Q8NH09 359 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 RHBDD1Q8TEB9 315 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 NTNG2Q96CW9 530 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 TECTAO75443 2155 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 WDFY3Q8IZQ1 3526 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 B4E171 279 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 SYT7O43581 403 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 STK17BO94768 372 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 PMS2P2O95744 297 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 CSF1P09603 554 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 GNALP38405 381 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 TSPAN7P41732 249 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 PRKXP51817 358 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 H3F3AP84243 136 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 PDZK1IP1Q13113 114 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 TAF13Q15543 124 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 C1orf100Q5SVJ3 147 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 AVPI1Q5T686 147 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 ZNF627Q7L945 461 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 OR4D6Q8NGJ1 314 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 ADAT3Q96EY9 351 aaPredicted RBP12.34□□□□□ -0.43
MSH5-202ENST00000375740 SEC22AQ96IW7 307 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 PIGMQ9H3S5 423 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 TAS2R8Q9NYW2 309 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 ASH2LQ9UBL3 628 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 FBXO4Q9UKT5 387 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 IGHV3-15A0A0B4J1V0 119 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 CCSO14618 274 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 LDLRAD4O15165 306 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 HSD11B1P28845 292 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 GABREP78334 506 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 TOMM20Q15388 145 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 PLEKHN1Q494U1 663 aaPredicted RBP12.34□□□□□ -0.43
MSH5-202ENST00000375740 CCDC157Q569K6 752 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 DCAF12Q5T6F0 453 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 UNQ6126/PRO20091Q6UXV3 157 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 OR1J2Q8NGS2 313 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 VRK1Q99986 396 aaPredicted RBP12.34□□□□□ -0.43
MSH5-202ENST00000375740 DKKL1Q9UK85 242 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 RHBDD3Q9Y3P4 386 aa12.34□□□□□ -0.43
MSH5-202ENST00000375740 A0A1B0GW55 424 aa12.33□□□□□ -0.44
MSH5-202ENST00000375740 LOC390937A0A1W2PQ73 354 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms