RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 E2F6O75461 281 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 GRPP07492 148 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 PRR23D2P0DMB1 279 aaPredicted RBP13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 ACKR3P25106 362 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 GNB2P62879 340 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 GRB2P62993 217 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 CSNK2BP67870 215 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 GFOD2Q3B7J2 385 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 WDR25Q64LD2 544 aaPredicted RBP13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 FAHD1Q6P587 224 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 LRRN1Q6UXK5 716 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 OTOSQ8NHW6 89 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 ZNF418Q8TF45 676 aaPredicted RBP13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 POP5Q969H6 163 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 TTTY10Q9BZA0 68 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 C1orf123Q9NWV4 160 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 MRPL15Q9P015 296 aaKnown RBP13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 MIOXQ9UGB7 285 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 COPS3Q9UNS2 423 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 RHBDD3Q9Y3P4 386 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 TENM1Q9UKZ4 2725 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 EBAG9O00559 213 aa13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 XRCC2O43543 280 aa13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 GMDSO60547 372 aa13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 FSTL3O95633 263 aa13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 LHBP01229 141 aa13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 TFF1P04155 84 aa13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 PITPNBP48739 271 aa13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 ARMCX4Q5H9R4 360 aa13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 DCDC5Q6ZRR9 648 aa13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 FAM90A1Q86YD7 464 aa13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 THEM6Q8WUY1 208 aa13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 RAB40AQ8WXH6 277 aa13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 RNF7Q9UBF6 113 aa13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 OR5V1Q9UGF6 321 aa13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 NUP50Q9UKX7 468 aa13.91□□□□□ -0.18
PDLIM7-201ENST00000355572 LRRC30A6NM36 301 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 PRKYO43930 277 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 MRPL3P09001 348 aaKnown RBP13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 ANXA8P13928 327 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 AMY2BP19961 511 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 HSD11B1P28845 292 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 GSK3AP49840 483 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 BLVRAP53004 296 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 CRISP1P54107 249 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 UBA52P62987 128 aaKnown RBP13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 APOFQ13790 326 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 TIGD6Q17RP2 521 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 DMRTC1Q5HYR2 192 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 C1orf87Q8N0U7 546 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 BPIFB2Q8N4F0 458 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 OR8B12Q8NGG6 310 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 OR8B3Q8NGG8 313 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 ERGIC1Q969X5 290 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 PPP1R14AQ96A00 147 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 OR8B2Q96RD0 313 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 FN3KRPQ9HA64 309 aa13.9□□□□□ -0.18
PDLIM7-201ENST00000355572 TRAV40A0A0B4J280 105 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 KIR2DS1A0A191URI9 304 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 ERICH4A6NGS2 130 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 LGALS8O00214 317 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 MAGEB4O15481 346 aaPredicted RBP13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 PRODHO43272 600 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 PLATP00750 562 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 GYPAP02724 150 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 LYNP07948 512 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 H2BFMP0C1H6 154 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 ALOX5APP20292 161 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 CFPP27918 469 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 SLC15A1P46059 708 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 SHFQ7M4L6 423 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 PARP8Q8N3A8 854 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 OR11L1Q8NGX0 322 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 FAM216AQ8WUB2 273 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 ZFAND2BQ8WV99 257 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 UPRTQ96BW1 309 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 PGAM5Q96HS1 289 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 NUDT16L1Q9BRJ7 211 aaKnown RBP13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 SUCNR1Q9BXA5 334 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 TOR3AQ9H497 397 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 TVP23BQ9NYZ1 205 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 LRP12Q9Y561 859 aa13.89□□□□□ -0.19
PDLIM7-201ENST00000355572 TMEM89A2RUT3 159 aa13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 DNAJC9-AS1A6NH13 148 aa13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 A6NLC8 198 aa13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 SFTPBP07988 381 aa13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 IRF2P14316 349 aa13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 PTGES3Q15185 160 aaKnown RBP13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 OR8B8Q15620 311 aa13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 RUSC1-AS1Q66K80 236 aa13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 WDR82Q6UXN9 313 aa13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 DOK3Q7L591 496 aa13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 AMIGO2Q86SJ2 522 aa13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 OR1M1Q8NGA1 313 aa13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 HPSE2Q8WWQ2 592 aa13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 ITPKCQ96DU7 683 aa13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 MRI1Q9BV20 369 aa13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 SLC22A4Q9H015 551 aa13.88□□□□□ -0.19
PDLIM7-201ENST00000355572 MMADHCQ9H3L0 296 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms