RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 Q8NFD4 153 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 STEAP2Q8NFT2 490 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 TMEM255BQ8WV15 326 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 PSMF1Q92530 271 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 ZNF524Q96C55 264 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 UBL7Q96S82 380 aaPredicted RBP8.98□□□□□ -0.97
SYNE1-203ENST00000354674 PARD6GQ9BYG4 376 aaPredicted RBP8.98□□□□□ -0.97
SYNE1-203ENST00000354674 NOP16Q9Y3C1 178 aaKnown RBP8.98□□□□□ -0.97
SYNE1-203ENST00000354674 CHCHD2Q9Y6H1 151 aaPredicted RBP8.98□□□□□ -0.97
SYNE1-203ENST00000354674 GVINP1Q7Z2Y8 2422 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 A0A087WV48 116 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 A0A0G2JK05 382 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 ACOD1A6NK06 481 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 RNASEK-C17orf49H0YIS7 233 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 MT-ND4LP03901 98 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 SOD3P08294 240 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 CD200P41217 278 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 RASGEF1BQ0VAM2 473 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 CBFBQ13951 182 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 OPN5Q6U736 354 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 PRICKLE2Q7Z3G6 844 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 IL22RA1Q8N6P7 574 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 GATSQ8NAP1 163 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 PPP1R1CQ8WVI7 109 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 GHSRQ92847 366 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 OR14A2Q96R54 314 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 PDCD1LG2Q9BQ51 273 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 TMPRSS13Q9BYE2 586 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 CHST5Q9GZS9 411 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 ADAM19Q9H013 955 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 METTL9Q9H1A3 318 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 KCNK15Q9H427 330 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 ZMAT3Q9HA38 289 aaKnown RBP8.98□□□□□ -0.97
SYNE1-203ENST00000354674 GDF2Q9UK05 429 aaPredicted RBP8.98□□□□□ -0.97
SYNE1-203ENST00000354674 ATXN7O15265 892 aaPredicted RBP8.98□□□□□ -0.97
SYNE1-203ENST00000354674 CLUP10909 449 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 LIFP15018 202 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 SSR4P51571 173 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 P2RX1P51575 399 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 KHDC3LQ587J8 217 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 WBP2NLQ6ICG8 309 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 CYB561A3Q8NBI2 242 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 OR10G3Q8NGC4 313 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 KLHDC3Q9BQ90 382 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 ELOVL1Q9BW60 279 aa8.98□□□□□ -0.97
SYNE1-203ENST00000354674 RFPL4AA6NLU0 287 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 RFPL4AL1F8VTS6 287 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 F10P00742 488 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 MAPK3P27361 379 aaPredicted RBP8.97□□□□□ -0.97
SYNE1-203ENST00000354674 IFNGR2P38484 337 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 PSMB10P40306 273 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 GLP1RP43220 463 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 PKIAP61925 76 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 C17orf67Q0P5P2 114 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 TSPAN31Q12999 210 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 TP53I3Q53FA7 332 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 TEX30Q5JUR7 227 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 DCAF10Q5QP82 559 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 C16orf54Q6UWD8 224 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 BPIFB2Q8N4F0 458 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 RFLNBQ8N5W9 214 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 TMEM239Q8WW34 195 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 C4orf36Q96KX1 117 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 OCSTAMPQ9BR26 566 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 C2orf88Q9BSF0 95 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 SEC11CQ9BY50 192 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 POFUT1Q9H488 388 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 BCO1Q9HAY6 547 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 EXOSC1Q9Y3B2 195 aaKnown RBP8.97□□□□□ -0.97
SYNE1-203ENST00000354674 PUS1Q9Y606 427 aaKnown RBP eCLIP8.97□□□□□ -0.97
SYNE1-203ENST00000354674 FREM2Q5SZK8 3169 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 A0A087WUJ7 227 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 M0QYG6 137 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 ETV2O00321 342 aaPredicted RBP8.97□□□□□ -0.97
SYNE1-203ENST00000354674 CA11O75493 328 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 RPA2P15927 270 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 SUMO3P55854 103 aaPredicted RBP8.97□□□□□ -0.97
SYNE1-203ENST00000354674 NHLH2Q02577 135 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 HGFACQ04756 655 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 CDNFQ49AH0 187 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 ALG10BQ5I7T1 473 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 TMPPEQ6ZT21 453 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 ATG4DQ86TL0 474 aaPredicted RBP8.97□□□□□ -0.97
SYNE1-203ENST00000354674 C15orf54Q8N8G6 183 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 GPR119Q8TDV5 335 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 TMEM208Q9BTX3 173 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 RGCCQ9H4X1 137 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 SPACA1Q9HBV2 294 aa8.97□□□□□ -0.97
SYNE1-203ENST00000354674 EXOGQ9Y2C4 368 aaKnown RBP8.97□□□□□ -0.97
SYNE1-203ENST00000354674 CARHSP1Q9Y2V2 147 aaKnown RBP8.97□□□□□ -0.97
SYNE1-203ENST00000354674 LOC102724200A0A096LPH7 203 aaPredicted RBP8.96□□□□□ -0.97
SYNE1-203ENST00000354674 GGT3PA6NGU5 568 aa8.96□□□□□ -0.97
SYNE1-203ENST00000354674 C17orf51A8MQB3 221 aa8.96□□□□□ -0.97
SYNE1-203ENST00000354674 HCRTR2O43614 444 aa8.96□□□□□ -0.97
SYNE1-203ENST00000354674 OR13C7P0DN81 318 aa8.96□□□□□ -0.97
SYNE1-203ENST00000354674 SLC2A1P11166 492 aa8.96□□□□□ -0.97
SYNE1-203ENST00000354674 GTF2F2P13984 249 aa8.96□□□□□ -0.97
SYNE1-203ENST00000354674 GSTM3P21266 225 aa8.96□□□□□ -0.97
SYNE1-203ENST00000354674 NKPD1Q17RQ9 610 aa8.96□□□□□ -0.97
SYNE1-203ENST00000354674 NSUN5P2Q63ZY6 315 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms