RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 UQCC2Q9BRT2 126 aa13.21□□□□□ -0.29
NUP50-201ENST00000347635 MPC2O95563 127 aa13.21□□□□□ -0.3
NUP50-201ENST00000347635 MSR1P21757 451 aa13.21□□□□□ -0.3
NUP50-201ENST00000347635 DUSP1P28562 367 aa13.21□□□□□ -0.3
NUP50-201ENST00000347635 CCL11P51671 97 aa13.21□□□□□ -0.3
NUP50-201ENST00000347635 AAED1Q7RTV5 226 aa13.21□□□□□ -0.3
NUP50-201ENST00000347635 PLPP5Q8NEB5 264 aa13.21□□□□□ -0.3
NUP50-201ENST00000347635 SEMA6DQ8NFY4 1073 aa13.21□□□□□ -0.3
NUP50-201ENST00000347635 OR5M9Q8NGP3 310 aa13.21□□□□□ -0.3
NUP50-201ENST00000347635 NGBQ9NPG2 151 aa13.21□□□□□ -0.3
NUP50-201ENST00000347635 A0A087WZY1 265 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 TRIM77I1YAP6 450 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 EML2O95834 649 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 HBE1P02100 147 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 CRIPAKQ8N1N5 446 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 ZPLD1Q8TCW7 415 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 SECTM1Q8WVN6 248 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 ZNF775Q96BV0 537 aaPredicted RBP13.2□□□□□ -0.3
NUP50-201ENST00000347635 SPACA1Q9HBV2 294 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 CTSFQ9UBX1 484 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 TMEM229AB2RXF0 380 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 MESP2Q0VG99 397 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 SLC38A9Q8NBW4 561 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 MARVELD3Q96A59 401 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 PAPOLGQ9BWT3 736 aaKnown RBP13.2□□□□□ -0.3
NUP50-201ENST00000347635 MS4A7Q9GZW8 240 aaPredicted RBP13.2□□□□□ -0.3
NUP50-201ENST00000347635 PLEKHA2Q9HB19 425 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 GPR160Q9UJ42 338 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 SMCO3A2RU48 225 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 DCTN6O00399 190 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 SLC34A2O95436 690 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 IRF2P14316 349 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 SEZ6L2Q6UXD5 910 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 C11orf40Q8WZ69 217 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 ZNF75AQ96N20 296 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 TRAPPC2LH3BP13 241 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 ST8SIA3O43173 380 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 SPINT1O43278 529 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 SEMA7AO75326 666 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 SFTA3P0C7M3 94 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 RAC2P15153 192 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 FPR2P25090 351 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 IDH3GP51553 393 aaPredicted RBP13.2□□□□□ -0.3
NUP50-201ENST00000347635 ZNF121P58317 390 aaPredicted RBP13.2□□□□□ -0.3
NUP50-201ENST00000347635 PPP1CAP62136 330 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 MKXQ8IYA7 352 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 TMEM52Q8NDY8 209 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 OIT3Q8WWZ8 545 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 NIT2Q9NQR4 276 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 GPR173Q9NS66 373 aa13.2□□□□□ -0.3
NUP50-201ENST00000347635 UMAD1C9J7I0 102 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 PCK2Q16822 640 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 PLXDC2Q6UX71 529 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 TMEM182Q6ZP80 229 aaPredicted RBP13.19□□□□□ -0.3
NUP50-201ENST00000347635 OR5T1Q8NG75 326 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 OR1S2Q8NGQ3 325 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 ENY2Q9NPA8 101 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 ANKUB1A6NFN9 424 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 CD79AP11912 226 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 GCH1P30793 250 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 FMODQ06828 376 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 CD226Q15762 336 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 RAB18Q9NP72 206 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 ANKRD30BLA7E2S9 258 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 DUS4LO95620 317 aaKnown RBP13.19□□□□□ -0.3
NUP50-201ENST00000347635 FOLR1P15328 257 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 PNLIPP16233 465 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 SPEM2Q0P670 501 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 ATPAF1Q5TC12 328 aaPredicted RBP13.19□□□□□ -0.3
NUP50-201ENST00000347635 ADAM5Q6NVV9 412 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 SLC22A25Q6T423 547 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 LRRTM1Q86UE6 522 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 STPG2Q8N412 459 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 STRAPQ9Y3F4 350 aaKnown RBP13.19□□□□□ -0.3
NUP50-201ENST00000347635 NINQ8N4C6 2090 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 C4orf47A7E2U8 309 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 E5RGE8 158 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 CSF2RBP32927 897 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 DMWDQ09019 674 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 FAM199XQ6PEV8 388 aaPredicted RBP13.19□□□□□ -0.3
NUP50-201ENST00000347635 OR51A4Q8NGJ6 313 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 OR2G3Q8NGZ4 309 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 OR10AC1Q8NH08 325 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 IL1F10Q8WWZ1 152 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 GFOD1Q9NXC2 390 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 ZMIZ1Q9ULJ6 1067 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 NSG2Q9Y328 171 aa13.19□□□□□ -0.3
NUP50-201ENST00000347635 A0A1W2PNR3 127 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 RNASEK-C17orf49H0YIS7 233 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 HRKO00198 91 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 ZNF354AO60765 605 aaPredicted RBP13.18□□□□□ -0.3
NUP50-201ENST00000347635 CTLA4P16410 223 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 TAGLN2P37802 199 aaKnown RBP13.18□□□□□ -0.3
NUP50-201ENST00000347635 ARTNQ5T4W7 220 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 LAMTOR1Q6IAA8 161 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 NIPSNAP3BQ9BS92 247 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 SARGQ9BW04 601 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 FAM60AQ9NP50 221 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 TSTD3H0UI37 97 aa13.18□□□□□ -0.3
NUP50-201ENST00000347635 VSIG10L2P0DP72 767 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms