RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 OR5K3A6NET4 321 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 HNF1AP20823 631 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 TNFSF4P23510 183 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 SLC24A4Q8NFF2 622 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 OR5B3Q8NH48 314 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 ANKUB1A6NFN9 424 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 HS3ST1O14792 307 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 SPINT2O43291 252 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 IGF2P01344 180 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 OR10J4P0C629 311 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 TNFRSF4P43489 277 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 RPL29P47914 159 aaKnown RBP15.75■□□□□ 0.11
SPAST-202ENST00000345662 PTP4A1Q93096 173 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 C4orf45Q96LM5 186 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 ARL2-SNX15V9GYD0 113 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 hCG_1809904A0A1W2PP81 198 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 A0A1W2PR64 198 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 A0A1W2PRV1 198 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 HIST1H3AP68431 136 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 LAIR1Q6GTX8 287 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 BATF2Q8N1L9 274 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 OR52N4Q8NGI2 321 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 LYRM2Q9NU23 88 aaPredicted RBP15.75■□□□□ 0.11
SPAST-202ENST00000345662 LRP12Q9Y561 859 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 XKRY2A2RUG3 117 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 WDR1O75083 606 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 MMP7P09237 267 aaPredicted RBP15.75■□□□□ 0.11
SPAST-202ENST00000345662 CT45A6P0DMU7 189 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 CT45A5P0DMU8 189 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 CT45A7P0DMV0 189 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 CT45A8P0DMV1 189 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 CT45A9P0DMV2 189 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 PPIAP62937 165 aaKnown RBP15.75■□□□□ 0.11
SPAST-202ENST00000345662 CT45A2Q5DJT8 189 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 CT45A1Q5HYN5 189 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 Q7L0L9 218 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 VN1R2Q8NFZ6 395 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 CT45A3Q8NHU0 189 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 MED29Q9NX70 200 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 CA14Q9ULX7 337 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 TRAPPC1Q9Y5R8 145 aa15.75■□□□□ 0.11
SPAST-202ENST00000345662 FER1L6Q2WGJ9 1857 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 ARPC3O15145 178 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 GP1BAP07359 652 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 ZNF92Q03936 586 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 RUNX2Q13950 521 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 RTN4RL1Q86UN2 441 aaPredicted RBP15.74■□□□□ 0.11
SPAST-202ENST00000345662 PINX1Q96BK5 328 aaKnown RBP15.74■□□□□ 0.11
SPAST-202ENST00000345662 PBX4Q9BYU1 374 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 SCRG1O75711 98 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 OR2J2O76002 312 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 SSR4P51571 173 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 HTRA3P83110 453 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 ZNF273Q14593 569 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 SLC25A30Q5SVS4 291 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 OVCH2Q7RTZ1 564 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 LIN7CQ9NUP9 197 aaKnown RBP15.74■□□□□ 0.11
SPAST-202ENST00000345662 HCFC2Q9Y5Z7 792 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 ZNF749O43361 778 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 CST2P09228 141 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 UBE2G1P62253 170 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 ETFDHQ16134 617 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 PWWP2BQ6NUJ5 590 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 FBXL17Q9UF56 701 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 PPP1R3CQ9UQK1 317 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 EFSO43281 561 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 VAMP5O95183 116 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 KLF9Q13886 244 aaPredicted RBP15.74■□□□□ 0.11
SPAST-202ENST00000345662 KCNAB1Q14722 419 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 Q3ZCU0 254 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 PRAMEF5Q5TYX0 476 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 PRAMEF6Q5VXH4 476 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 FAHD2BQ6P2I3 314 aaPredicted RBP15.74■□□□□ 0.11
SPAST-202ENST00000345662 ISOC2Q96AB3 205 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 FAHD2AQ96GK7 314 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 B3GAT1Q9P2W7 334 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 CLCF1Q9UBD9 225 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 LPAR3Q9UBY5 353 aa15.74■□□□□ 0.11
SPAST-202ENST00000345662 IGLV3-16A0A075B6K0 115 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 M0R143 59 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 ICOSLGO75144 302 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 RPL7L1Q6DKI1 246 aaKnown RBP15.73■□□□□ 0.11
SPAST-202ENST00000345662 BCORQ6W2J9 1755 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 GTF2H5Q6ZYL4 71 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 BAHD1Q8TBE0 780 aaPredicted RBP15.73■□□□□ 0.11
SPAST-202ENST00000345662 TPPP3Q9BW30 176 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 TCAPO15273 167 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 PPM1DO15297 605 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 NRASP01111 189 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 IGHA1P01876 353 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 ARG1P05089 322 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 CMTM2Q8TAZ6 248 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 FAM174AQ8TBP5 190 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 ZNF296Q8WUU4 475 aaPredicted RBP15.73■□□□□ 0.11
SPAST-202ENST00000345662 ST8SIA1Q92185 356 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 PPP1R3EQ9H7J1 279 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 FGF21Q9NSA1 209 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 TNFRSF10CO14798 259 aa15.73■□□□□ 0.11
SPAST-202ENST00000345662 GATCO43716 136 aaKnown RBP15.73■□□□□ 0.11
SPAST-202ENST00000345662 PMP22Q01453 160 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms