RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 KLBQ86Z14 1044 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 ELMOD2Q8IZ81 293 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 OR5AS1Q8N127 324 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 KLHL36Q8N4N3 616 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 RFLNBQ8N5W9 214 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 SPERTQ8NA61 448 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 CCDC54Q8NEL0 328 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 OR8B12Q8NGG6 310 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 GGHQ92820 318 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 C4orf36Q96KX1 117 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 CNBD2Q96M20 576 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 CXXC4Q9H2H0 198 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 POFUT1Q9H488 388 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 MSL2Q9HCI7 577 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 ABCB9Q9NP78 766 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 MRPL15Q9P015 296 aaKnown RBP10.1□□□□□ -0.79
SNCA-202ENST00000345009 PSORS1C1Q9UIG5 152 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 ERGIC3Q9Y282 383 aa10.1□□□□□ -0.79
SNCA-202ENST00000345009 CAB39Q9Y376 341 aaPredicted RBP10.1□□□□□ -0.79
SNCA-202ENST00000345009 CSMD2Q7Z408 3487 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 PRR32B1ATL7 298 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 PTGES3LE9PB15 166 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 DENRO43583 198 aaKnown RBP10.09□□□□□ -0.79
SNCA-202ENST00000345009 XPNPEP2O43895 674 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 GMDSO60547 372 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 IGHV4-39P01824 125 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 ADH4P08319 380 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 HTR1AP08908 422 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 DAOP14920 347 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 ZNF12P17014 697 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 SRP9P49458 86 aaKnown RBP10.09□□□□□ -0.79
SNCA-202ENST00000345009 GSK3AP49840 483 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 OR12D2P58182 307 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 CCL8P80075 99 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 MRPS11P82912 194 aaKnown RBP10.09□□□□□ -0.79
SNCA-202ENST00000345009 FAM3AP98173 230 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 AHSA2Q719I0 299 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 ZCCHC24Q8N2G6 241 aaKnown RBP10.09□□□□□ -0.79
SNCA-202ENST00000345009 BHLHE23Q8NDY6 225 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 OR2Z1Q8NG97 314 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 UBASH3BQ8TF42 649 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 RORBQ92753 470 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 ELMOD3Q96FG2 381 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 SORCS2Q96PQ0 1159 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 SLC30A2Q9BRI3 323 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 RHNO1Q9BSD3 238 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 TPK1Q9H3S4 243 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 SAP30LQ9HAJ7 183 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 DLL4Q9NR61 685 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 ACOXLQ9NUZ1 547 aa10.09□□□□□ -0.79
SNCA-202ENST00000345009 A0A1B0GVI7 797 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 LOC390937A0A1W2PQ73 354 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 NDUFS8O00217 210 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 SLC1A7O00341 560 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 MYL12BO14950 172 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 PNPP00491 289 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 IGHV1-46P01743 117 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 CD55P08174 381 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 UBCP0CG48 685 aaKnown RBP10.08□□□□□ -0.8
SNCA-202ENST00000345009 LIMS3P0CW19 117 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 LIMS4P0CW20 117 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 PDLIM4P50479 330 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 CCR9P51686 369 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 TNFAIP6P98066 277 aaPredicted RBP10.08□□□□□ -0.8
SNCA-202ENST00000345009 SLC3A1Q07837 685 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 RIPPLY1Q0D2K3 151 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 TESK1Q15569 626 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 OR8G1Q15617 311 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 TSTQ16762 297 aaKnown RBP10.08□□□□□ -0.8
SNCA-202ENST00000345009 CLEC12BQ2HXU8 276 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 CCDC58Q4VC31 144 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 RBM48Q5RL73 367 aaKnown RBP10.08□□□□□ -0.8
SNCA-202ENST00000345009 TMEM244Q5VVB8 128 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 FDX2Q6P4F2 183 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 DOK3Q7L591 496 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 CATSPERDQ86XM0 798 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 SEMA6DQ8NFY4 1073 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 OR56B2PQ8NGI1 322 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 OR2G2Q8NGZ5 317 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 OR51E1Q8TCB6 317 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 RDH5Q92781 318 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 HIST1H2AAQ96QV6 131 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 GPR84Q9NQS5 396 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 C14orf119Q9NWQ9 140 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 BABAM2Q9NXR7 383 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 ZNF319Q9P2F9 582 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 IL19Q9UHD0 177 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 PCDHGB5Q9Y5G0 923 aa10.08□□□□□ -0.8
SNCA-202ENST00000345009 OTOGQ6ZRI0 2925 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 LOC100996750A0A140TA64 210 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 hCG_38984A0A1B0GV85 526 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 ZSCAN5BA6NJL1 495 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 ANXA2P2A6NMY6 339 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 DHRS7CA6NNS2 312 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 IFNL4K9M1U5 179 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 SYT7O43581 403 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 NDUFS7O75251 213 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 SRSF10O75494 262 aaKnown RBP10.07□□□□□ -0.8
SNCA-202ENST00000345009 DHRS3O75911 302 aa10.07□□□□□ -0.8
SNCA-202ENST00000345009 TTRP02766 147 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms