RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TMEM37Q8WXS4 190 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 MAP3K3Q99759 626 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 FBXL17Q9UF56 701 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 ARPC3O15145 178 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 EMC6Q9BV81 110 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 PHIPQ8WWQ0 1821 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 MPPED1O15442 326 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 CRHP06850 196 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 PPICP45877 212 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 RPL29P47914 159 aaKnown RBP16.3■□□□□ 0.2
SMC4-201ENST00000344722 RPS15P62841 145 aaKnown RBP16.3■□□□□ 0.2
SMC4-201ENST00000344722 RPL7L1Q6DKI1 246 aaKnown RBP16.3■□□□□ 0.2
SMC4-201ENST00000344722 REEP6Q96HR9 211 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 LHX6Q9UPM6 363 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 LRP12Q9Y561 859 aa16.3■□□□□ 0.2
SMC4-201ENST00000344722 FFAR1O14842 300 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 GDF1P27539 372 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 FOLR3P41439 243 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 TGFBR3Q03167 851 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 TIGITQ495A1 244 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 PACRGQ96M98 296 aaPredicted RBP16.29■□□□□ 0.2
SMC4-201ENST00000344722 SHARPINQ9H0F6 387 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 GNG12Q9UBI6 72 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 LSM2Q9Y333 95 aaKnown RBP16.29■□□□□ 0.2
SMC4-201ENST00000344722 TMED3Q9Y3Q3 217 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 CXorf51AA0A1B0GTR3 108 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 CCKARP32238 428 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 HLA-DRB3P79483 266 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 OR52N4Q8NGI2 321 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 TECTBQ96PL2 329 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 SOX7Q9BT81 388 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 CXCL2P19875 107 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 GJA4P35212 333 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 SLC35G3Q8N808 338 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 MRPL43Q8N983 215 aaKnown RBP16.29■□□□□ 0.2
SMC4-201ENST00000344722 MORN4Q8NDC4 146 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 ISOC2Q96AB3 205 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 MS4A4AQ96JQ5 239 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 MS4A10Q96PG2 267 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 THAP10Q9P2Z0 257 aaPredicted RBP16.29■□□□□ 0.2
SMC4-201ENST00000344722 SHROOM3Q8TF72 1996 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 OPN1MWP04001 364 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 ARG1P05089 322 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 OPN1MW2P0DN77 364 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 OPN1MW3P0DN78 364 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 TCN2P20062 427 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 PNRC1Q12796 327 aaPredicted RBP16.29■□□□□ 0.2
SMC4-201ENST00000344722 PMS2P11Q13670 270 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 ELAVL1Q15717 326 aaKnown RBP16.29■□□□□ 0.2
SMC4-201ENST00000344722 RBMXL3Q8N7X1 1067 aaKnown RBP16.29■□□□□ 0.2
SMC4-201ENST00000344722 GPR87Q9BY21 358 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 LIN7CQ9NUP9 197 aaKnown RBP16.29■□□□□ 0.2
SMC4-201ENST00000344722 ARL2-SNX15V9GYD0 113 aa16.29■□□□□ 0.2
SMC4-201ENST00000344722 LOC105371267A0A1B0GV96 52 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 ZIC2O95409 532 aaPredicted RBP16.28■□□□□ 0.2
SMC4-201ENST00000344722 PTBP3O95758 552 aaKnown RBP16.28■□□□□ 0.2
SMC4-201ENST00000344722 SLC25A4P12235 298 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 MLF1P58340 268 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 IL13RA2Q14627 380 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 LIMS2Q7Z4I7 341 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 FAM3CQ92520 227 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 MBNL1Q9NR56 388 aaKnown RBP16.28■□□□□ 0.2
SMC4-201ENST00000344722 ZNF107Q9UII5 783 aaPredicted RBP16.28■□□□□ 0.2
SMC4-201ENST00000344722 LY86O95711 162 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 SULT1A1P50225 295 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 EEF1A2Q05639 463 aaKnown RBP16.28■□□□□ 0.2
SMC4-201ENST00000344722 BHLHA9Q7RTU4 235 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 OR2A1Q8NGT9 310 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 TMEM241Q24JQ0 296 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 TMEM91Q6ZNR0 172 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 TAAR9Q96RI9 348 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 SIPA1L3O60292 1781 aaPredicted RBP16.28■□□□□ 0.2
SMC4-201ENST00000344722 NPIPB8E9PQR5 432 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 DEGS1O15121 323 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 IAPPP10997 89 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 HIST1H1DP16402 221 aaKnown RBP16.28■□□□□ 0.2
SMC4-201ENST00000344722 PXNP49023 591 aaPredicted RBP16.28■□□□□ 0.2
SMC4-201ENST00000344722 PLGLAQ15195 96 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 MAML2Q8IZL2 1156 aaPredicted RBP16.28■□□□□ 0.2
SMC4-201ENST00000344722 OR4D9Q8NGE8 314 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 CA10Q9NS85 328 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 TAF1P21675 1872 aa16.28■□□□□ 0.2
SMC4-201ENST00000344722 ZNF814B7Z6K7 855 aa16.27■□□□□ 0.2
SMC4-201ENST00000344722 ENPP1P22413 925 aa16.27■□□□□ 0.2
SMC4-201ENST00000344722 MPGP29372 298 aa16.27■□□□□ 0.2
SMC4-201ENST00000344722 ABHD17BQ5VST6 288 aa16.27■□□□□ 0.2
SMC4-201ENST00000344722 RSPO2Q6UXX9 243 aaPredicted RBP16.27■□□□□ 0.2
SMC4-201ENST00000344722 FGF13Q92913 245 aa16.27■□□□□ 0.2
SMC4-201ENST00000344722 CIB3Q96Q77 187 aaPredicted RBP16.27■□□□□ 0.2
SMC4-201ENST00000344722 OR5K3A6NET4 321 aa16.27■□□□□ 0.2
SMC4-201ENST00000344722 RBFOX3A6NFN3 312 aa16.27■□□□□ 0.2
SMC4-201ENST00000344722 PRAMEF25A6NGN4 478 aa16.27■□□□□ 0.2
SMC4-201ENST00000344722 C10orf111Q8N326 155 aa16.27■□□□□ 0.2
SMC4-201ENST00000344722 NT5CQ8TCD5 201 aa16.27■□□□□ 0.2
SMC4-201ENST00000344722 PCDHGA9Q9Y5G4 932 aaKnown RBP16.27■□□□□ 0.2
SMC4-201ENST00000344722 TRAF3IP2O43734 574 aaPredicted RBP16.27■□□□□ 0.2
SMC4-201ENST00000344722 LAIR1Q6GTX8 287 aa16.27■□□□□ 0.2
SMC4-201ENST00000344722 GTF2H5Q6ZYL4 71 aa16.27■□□□□ 0.2
SMC4-201ENST00000344722 FAM174AQ8TBP5 190 aa16.27■□□□□ 0.2
SMC4-201ENST00000344722 H3BNC9 293 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms