RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 LHBP01229 141 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 GSTT1P30711 240 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 CSNK2BP67870 215 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 PRB3Q04118 309 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 GINS1Q14691 196 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 GFOD2Q3B7J2 385 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 TMEM236Q5W0B7 351 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 NLRC3Q7RTR2 1065 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 CCDC197Q8NCU1 140 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 ERGIC1Q969X5 290 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 SPSB4Q96A44 273 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 INTS14Q96SY0 518 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 CMC2Q9NRP2 79 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 PDP1Q9P0J1 537 aaPredicted RBP11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 RHBDD3Q9Y3P4 386 aa11.09□□□□□ -0.63
NUDCD3-201ENST00000338427 hCG_1807616A0A1W2PRN6 198 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 RIIAD1A6NNX1 92 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 ZNF878C9JN71 531 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 HOXA3O43365 443 aaPredicted RBP11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 SELENOFO60613 162 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 GLCEO94923 617 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 IFNGP01579 166 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 RAP2AP10114 183 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 CALB2P22676 271 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 GRK5P34947 590 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 ZNF121P58317 390 aaPredicted RBP11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 GMFBP60983 142 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 ARF6P62330 175 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 SRSF4Q08170 494 aaKnown RBP11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 DMRTC1Q5HYR2 192 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 PLBD1Q6P4A8 553 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 CD300LDQ6UXZ3 194 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 FAM90A1Q86YD7 464 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 PDZD9Q8IXQ8 264 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 TIGD4Q8IY51 512 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 BBS1Q8NFJ9 593 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 OR5T2Q8NGG2 359 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 THEM6Q8WUY1 208 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 RNF133Q8WVZ7 376 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 REEP6Q96HR9 211 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 LRGUKQ96M69 825 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 TBX15Q96SF7 602 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 CCL13Q99616 98 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 ZNF747Q9BV97 191 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 FGF23Q9GZV9 251 aaPredicted RBP11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 SLC22A4Q9H015 551 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 MRPL15Q9P015 296 aaKnown RBP11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 ERVK-18Q9QC07 812 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 BAIAP2Q9UQB8 552 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 KLHDC2Q9Y2U9 406 aa11.08□□□□□ -0.64
NUDCD3-201ENST00000338427 CENPVL3A0A0U1RRI6 287 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 OOEPA6NGQ2 149 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 DVL1O14640 695 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 PHYHO14832 338 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 FAM107AO95990 144 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 RNASE1P07998 156 aaKnown RBP11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 PPIAL4GP0DN37 164 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 MMP9P14780 707 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 ZNF3P17036 446 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 AMY2BP19961 511 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 CPT2P23786 658 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 HSD11B1P28845 292 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 CFHR2P36980 270 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 GSK3AP49840 483 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 DLX1P56177 255 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 FOXL1Q12952 345 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 TIGD6Q17RP2 521 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 C9orf139Q6ZV77 190 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 BTN2A1Q7KYR7 527 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 CPOQ8IVL8 374 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 ARHGAP24Q8N264 748 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 OR1M1Q8NGA1 313 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 TEX47Q8TBZ9 253 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 LRRC29Q8WV35 223 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 ZDHHC16Q969W1 377 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 PPP1R14AQ96A00 147 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 PGAM5Q96HS1 289 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 LYZL4Q96KX0 146 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 MUC13Q9H3R2 512 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 MARCH7Q9H992 704 aa11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 UNKLQ9H9P5 680 aaKnown RBP11.07□□□□□ -0.64
NUDCD3-201ENST00000338427 TRAV38-1A0A0B4J264 116 aa11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 ANKRD30BLA7E2S9 258 aa11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 ZNF879B4DU55 563 aa11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 PSMD9O00233 223 aa11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 GNGT2O14610 69 aa11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 CDIPTO14735 213 aa11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 TMPRSS2O15393 492 aa11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 XRCC2O43543 280 aa11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 TOX4O94842 621 aa11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 H2BFMP0C1H6 154 aa11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 MDKP21741 143 aaPredicted RBP11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 ACKR3P25106 362 aa11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 OPRL1P41146 370 aa11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 NAA10P41227 235 aaPredicted RBP11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 MTNR1AP48039 350 aa11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 GRB2P62993 217 aaKnown RBP11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 CDK5Q00535 292 aa11.06□□□□□ -0.64
NUDCD3-201ENST00000338427 C16orf87Q6PH81 154 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms