RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SERTAD4Q9NUC0 356 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 OR5AC2Q9NZP5 309 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 OSGIN2Q9Y236 505 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 OR51B4Q9Y5P0 310 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 UNC13CQ8NB66 2214 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 TRGC2P03986 189 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 ZNF43P17038 809 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 PIGPP57054 158 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 ZDHHC22Q8N966 263 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 RLN3Q8WXF3 142 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 RSPRY1Q96DX4 576 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 REEP6Q96HR9 211 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 LRFN5Q96NI6 719 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 PRDM7Q9NQW5 492 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 TREM2Q9NZC2 230 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 DKKL1Q9UK85 242 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 TCRBV21S2A2A0A5A6 115 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 ANKUB1A6NFN9 424 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 HMGB3O15347 200 aaKnown RBP11.91□□□□□ -0.5
COL2A1-201ENST00000337299 PRF1P14222 555 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 HNRNPKP61978 463 aaKnown RBP eCLIP11.91□□□□□ -0.5
COL2A1-201ENST00000337299 NKAIN2Q5VXU1 208 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 CLEC18BQ6UXF7 455 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 UEVLDQ8IX04 471 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 ZPLD1Q8TCW7 415 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 EMG1Q92979 244 aaKnown RBP11.91□□□□□ -0.5
COL2A1-201ENST00000337299 AQP7O14520 342 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 ST8SIA5O15466 376 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 FAM157BP0CG42 384 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 HNF1AP20823 631 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 NTSR1P30989 418 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 P2RY2P41231 377 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 RUNX2Q13950 521 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 ZNF345Q14585 488 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 IL22RA2Q969J5 263 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 ZNF681Q96N22 645 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 LPAR4Q99677 370 aa11.91□□□□□ -0.5
COL2A1-201ENST00000337299 NPIPB8E9PQR5 432 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 ONECUT2O95948 504 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 CCR2P41597 374 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 SSBP1Q04837 148 aaKnown RBP11.9□□□□□ -0.5
COL2A1-201ENST00000337299 UBE2V2Q15819 145 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 TMEM268Q5VZI3 342 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 RTN4IP1Q8WWV3 396 aaPredicted RBP11.9□□□□□ -0.5
COL2A1-201ENST00000337299 MSL2Q9HCI7 577 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 GCM1Q9NP62 436 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 MBNL1Q9NR56 388 aaKnown RBP11.9□□□□□ -0.5
COL2A1-201ENST00000337299 LOC102724200A0A096LPH7 203 aaPredicted RBP11.9□□□□□ -0.5
COL2A1-201ENST00000337299 ZNF816-ZNF321PA0A0X1KG74 233 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 A0A1W2PNV4 684 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 WDR88Q6ZMY6 472 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 ZNF321PQ8N8H1 164 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 PRRG4Q9BZD6 226 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 OR10A5Q9H207 317 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 PARD6AQ9NPB6 346 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 A0A0B4J2E0 115 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 A0A0G2JK05 382 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 A0A1B0GX12 115 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 ZNF729A6NN14 1252 aaPredicted RBP11.9□□□□□ -0.5
COL2A1-201ENST00000337299 CST2P09228 141 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.9□□□□□ -0.5
COL2A1-201ENST00000337299 LRRC18Q8N456 261 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 BTF3L4Q96K17 158 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 OR5B2Q96R09 309 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 GPR87Q9BY21 358 aa11.9□□□□□ -0.5
COL2A1-201ENST00000337299 OTOFQ9HC10 1997 aa11.9□□□□□ -0.51
COL2A1-201ENST00000337299 CLDN34H7C241 214 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 SFT2D2O95562 160 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 GJA4P35212 333 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 BIDP55957 195 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 RAB38P57729 211 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 VAMP3Q15836 100 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 OR8G2PQ6IF36 304 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 MCEMP1Q8IX19 187 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 OR2L13Q8N349 312 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 OR4C3Q8NH37 302 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 APOOQ9BUR5 198 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 COA4Q9NYJ1 87 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 MRPS17Q9Y2R5 130 aaKnown RBP11.89□□□□□ -0.51
COL2A1-201ENST00000337299 TNFP01375 233 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 OR5H8P0DN80 308 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 DUSP1P28562 367 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 DAP3P51398 398 aaKnown RBP11.89□□□□□ -0.51
COL2A1-201ENST00000337299 DLK1P80370 383 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 EGR3Q06889 387 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 TMEM240Q5SV17 173 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 ZNF439Q8NDP4 499 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 OR13D1Q8NGV5 346 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 ALG14Q96F25 216 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 HINT2Q9BX68 163 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 OR5K4A6NMS3 321 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 H3BQ15 152 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 TRAPPC6AO75865 159 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 FBP1P09467 338 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 HOXB1P14653 301 aaPredicted RBP11.89□□□□□ -0.51
COL2A1-201ENST00000337299 CD1CP29017 333 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 BLKP51451 505 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 ERVS71-1P61550 626 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 OR5I1Q13606 314 aa11.89□□□□□ -0.51
COL2A1-201ENST00000337299 ZNF787Q6DD87 383 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms