RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SCMH1Q96GD3 660 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 OR2M2Q96R28 347 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 B3GAT1Q9P2W7 334 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 ZNF281Q9Y2X9 895 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 LOC107986453A0A1B0GWG9 222 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 NPIPB7O75200 414 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 FGF9P31371 208 aaPredicted RBP14□□□□□ -0.17
PDGFB-201ENST00000331163 SLC22A6Q4U2R8 563 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 CD276Q5ZPR3 534 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 ZNF679Q8IYX0 411 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 RELL2Q8NC24 303 aaPredicted RBP14□□□□□ -0.17
PDGFB-201ENST00000331163 OR10K1Q8NGX5 313 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 OR52N1Q8NH53 320 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 HAS2Q92819 552 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 SOX7Q9BT81 388 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 SPRY4Q9C004 299 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 ZNF436Q9C0F3 470 aaPredicted RBP14□□□□□ -0.17
PDGFB-201ENST00000331163 TMEM138Q9NPI0 162 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 GPR84Q9NQS5 396 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 FLVCR1Q9Y5Y0 555 aa14□□□□□ -0.17
PDGFB-201ENST00000331163 PYCARD-AS1I3L0S3 204 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 PDCD5O14737 125 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 NME2P1O60361 137 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 NR2C1P13056 603 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 NPR2P20594 1047 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 NME2P22392 152 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 ADH6P28332 368 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 FHL1Q13642 323 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 SLC17A1Q14916 467 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 CDK5R1Q15078 307 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 LINC01590Q5TEZ4 76 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 FADS6Q8N9I5 356 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 OR8S1Q8NH09 359 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 CYSLTR2Q9NS75 346 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 NCOA6Q14686 2063 aaPredicted RBP13.99□□□□□ -0.17
PDGFB-201ENST00000331163 GMDSO60547 372 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 SERPINA3P01011 423 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 IL2RAP01589 272 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 ANXA7P20073 488 aaKnown RBP13.99□□□□□ -0.17
PDGFB-201ENST00000331163 BTCP35070 178 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 ZNF239Q16600 458 aaKnown RBP13.99□□□□□ -0.17
PDGFB-201ENST00000331163 EMC4Q5J8M3 183 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 RPL22L1Q6P5R6 122 aaKnown RBP13.99□□□□□ -0.17
PDGFB-201ENST00000331163 NHLRC1Q6VVB1 395 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 SLCO5A1Q9H2Y9 848 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 IFT46Q9NQC8 304 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 PARPBPQ9NWS1 579 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 SCP2D1Q9UJQ7 156 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 HLA-DQB1P01920 261 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 GSG1Q2KHT4 349 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 ELP2Q6IA86 826 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 FAM122AQ96E09 287 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 TAS2R4Q9NYW5 299 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 FRRS1LQ9P0K9 344 aa13.99□□□□□ -0.17
PDGFB-201ENST00000331163 RAD52P43351 418 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 PDCD1Q15116 288 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 PYHIN1Q6K0P9 492 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 OR51D1Q8NGF3 324 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 OR52B4Q8NGK2 314 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 HHLA2Q9UM44 414 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.98□□□□□ -0.17
PDGFB-201ENST00000331163 HSPB6O14558 160 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 LPLP06858 475 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 IFI6P09912 130 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 FAHP16930 419 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 RAB1AP62820 205 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 SLC35D3Q5M8T2 416 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 RPRMLQ8N4K4 120 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 SPRR3Q9UBC9 169 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 M0R135 149 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 PRRG2O14669 202 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 GDNFP39905 211 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 NKAPLQ5M9Q1 402 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 ATRAIDQ6UW56 229 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 GJC3Q8NFK1 279 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 ZCCHC14Q8WYQ9 949 aaKnown RBP13.98□□□□□ -0.17
PDGFB-201ENST00000331163 ZNF799Q96GE5 643 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 SOSTQ9BQB4 213 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 C20orf85Q9H1P6 137 aa13.98□□□□□ -0.17
PDGFB-201ENST00000331163 GGT3PA6NGU5 568 aa13.97□□□□□ -0.17
PDGFB-201ENST00000331163 CSPG4Q6UVK1 2322 aa13.97□□□□□ -0.17
PDGFB-201ENST00000331163 CPT1CQ8TCG5 803 aa13.97□□□□□ -0.17
PDGFB-201ENST00000331163 ASF1BQ9NVP2 202 aa13.97□□□□□ -0.17
PDGFB-201ENST00000331163 TPPPO94811 219 aa13.97□□□□□ -0.17
PDGFB-201ENST00000331163 MNDAP41218 407 aa13.97□□□□□ -0.17
PDGFB-201ENST00000331163 FABP6P51161 128 aa13.97□□□□□ -0.17
PDGFB-201ENST00000331163 ZP1P60852 638 aa13.97□□□□□ -0.17
PDGFB-201ENST00000331163 PMPCAQ10713 525 aa13.97□□□□□ -0.17
PDGFB-201ENST00000331163 PABPC1L2AQ5JQF8 200 aa13.97□□□□□ -0.17
PDGFB-201ENST00000331163 ATG5Q9H1Y0 275 aa13.97□□□□□ -0.17
PDGFB-201ENST00000331163 CA10Q9NS85 328 aa13.97□□□□□ -0.17
PDGFB-201ENST00000331163 TNRC6AQ8NDV7 1962 aaKnown RBP13.97□□□□□ -0.17
PDGFB-201ENST00000331163 A6NLC8 198 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 TMEM225BP0DP42 221 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 AKR1C2P52895 323 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 AKR1C1Q04828 323 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 FAM74A1Q5RGS3 127 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 OR51A2Q8NGJ7 313 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 OR6X1Q8NH79 312 aa13.96□□□□□ -0.17
PDGFB-201ENST00000331163 SPTSSAQ969W0 71 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms