RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 TAS2R30P59541 319 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 SSX7Q7RTT5 188 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 OR10R2Q8NGX6 335 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 OR2G2Q8NGZ5 317 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 MTCH1Q9NZJ7 389 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 TGOLN2O43493 480 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 SELEP16581 610 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 S100A11P31949 105 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 GPR12P47775 334 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 RFX2P48378 723 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 CDK5R1Q15078 307 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 TRIP6Q15654 476 aaKnown RBP9.16□□□□□ -0.94
CHD3-201ENST00000330494 ZNF628Q5EBL2 1059 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 GPBAR1Q8TDU6 330 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 LRRC3BQ96PB8 259 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 EXOSC3Q9NQT5 275 aaKnown RBP9.16□□□□□ -0.94
CHD3-201ENST00000330494 RP1L1Q8IWN7 2480 aaPredicted RBP9.16□□□□□ -0.94
CHD3-201ENST00000330494 OTOFQ9HC10 1997 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 PMS2P1A4D2B8 440 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 GSK3AP49840 483 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 SNRPNP63162 240 aaKnown RBP9.15□□□□□ -0.94
CHD3-201ENST00000330494 FOXB2Q5VYV0 432 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 FAHD1Q6P587 224 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 IP6K3Q96PC2 410 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 PLEKHF2Q9H8W4 249 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 RGPD3A6NKT7 1758 aaPredicted RBP9.15□□□□□ -0.94
CHD3-201ENST00000330494 TUBGCP6Q96RT7 1819 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 KNTC1P50748 2209 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 HRKO00198 91 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 GLAP06280 429 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 CCL4P13236 92 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 MESP2Q0VG99 397 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 VAMP3Q15836 100 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 CATSPERDQ86XM0 798 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 SLC38A9Q8NBW4 561 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 TIMD4Q96H15 378 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 OR2A5Q96R48 311 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 ST3GAL6Q9Y274 331 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 FLVCR1Q9Y5Y0 555 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 LOC102724200A0A096LPH7 203 aaPredicted RBP9.15□□□□□ -0.94
CHD3-201ENST00000330494 AGAP14A8MT82 685 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 M0R296 226 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 PMS2P2O95744 297 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 IL3RAP26951 378 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 ZNF816Q0VGE8 651 aaPredicted RBP9.15□□□□□ -0.94
CHD3-201ENST00000330494 RNF141Q8WVD5 230 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 DHRS9Q9BPW9 319 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 TMPRSS13Q9BYE2 586 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 SLC25A19Q9HC21 320 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 CDC14BO60729 498 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 LYZL6O75951 148 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 RGS11O94810 467 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 FCGR2CP31995 323 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.15□□□□□ -0.94
CHD3-201ENST00000330494 TMUB2Q71RG4 321 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 SCARB1Q8WTV0 552 aa9.15□□□□□ -0.94
CHD3-201ENST00000330494 NME2P1O60361 137 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 LALBAP00709 142 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 CD3DP04234 171 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 OR2B8PP59922 312 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 HABP2Q14520 560 aaPredicted RBP9.15□□□□□ -0.95
CHD3-201ENST00000330494 KIAA0040Q15053 153 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 ZNF573Q86YE8 665 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 GABRG1Q8N1C3 465 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 GPR32P1Q8NGA4 272 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 MARCH1Q8TCQ1 289 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 CDCA4Q9BXL8 241 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 CHST6Q9GZX3 395 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 KLK11Q9UBX7 282 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 CKAP5Q14008 2032 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 PTBP3O95758 552 aaKnown RBP9.15□□□□□ -0.95
CHD3-201ENST00000330494 DCTDP32321 178 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 RAB1AP62820 205 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 MAMSTRQ6ZN01 415 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 TIPARPQ7Z3E1 657 aaKnown RBP9.15□□□□□ -0.95
CHD3-201ENST00000330494 THNSL2Q86YJ6 484 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 SKA3Q8IX90 412 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 OR2AE1Q8NHA4 323 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 MAP6Q96JE9 813 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 ARHGDIGQ99819 225 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 HDGFL3Q9Y3E1 203 aa9.15□□□□□ -0.95
CHD3-201ENST00000330494 RER1O15258 196 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 DHHO43323 396 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 ZNF626Q68DY1 528 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 OR4S1Q8NGB4 309 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 SFT2D1Q8WV19 159 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 ZNF75AQ96N20 296 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 ZPBPQ9BS86 351 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 TAF9BQ9HBM6 251 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 A0A1W2PPH5 198 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 SPINT1O43278 529 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 DFFBO76075 338 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 OR10J4P0C629 311 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 BMP5P22003 454 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 TLE4Q04727 773 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 TOMM34Q15785 309 aaPredicted RBP9.14□□□□□ -0.95
CHD3-201ENST00000330494 BAK1Q16611 211 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 ZNF718Q3SXZ3 478 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 PLA1AQ53H76 456 aa9.14□□□□□ -0.95
CHD3-201ENST00000330494 CALHM3Q86XJ0 350 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms