RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 GDPGP1Q6ZNW5 385 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 OR5AS1Q8N127 324 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 OR56B2PQ8NGI1 322 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 OR13C9Q8NGT0 318 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 NPRL2Q8WTW4 380 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 NEUROG1Q92886 237 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 SPSB4Q96A44 273 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 REPIN1Q9BWE0 567 aaKnown RBP13.13□□□□□ -0.31
PRPF3-201ENST00000324862 V9GYS6 101 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 CRYBG3Q68DQ2 2970 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 CASKO14936 926 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 SLC22A1O15245 554 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 GATBO75879 557 aaKnown RBP13.13□□□□□ -0.31
PRPF3-201ENST00000324862 MRPL21Q7Z2W9 205 aaKnown RBP13.13□□□□□ -0.31
PRPF3-201ENST00000324862 LRP11Q86VZ4 500 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 CMBLQ96DG6 245 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 PLPPR2Q96GM1 343 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 SPACA5Q96QH8 159 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 HS3ST6Q96QI5 342 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 BARHL1Q9BZE3 327 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 PLEKHA1Q9HB21 404 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 NDRG3Q9UGV2 375 aa13.13□□□□□ -0.31
PRPF3-201ENST00000324862 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.12□□□□□ -0.31
PRPF3-201ENST00000324862 ZNF701M0R085 212 aaPredicted RBP13.12□□□□□ -0.31
PRPF3-201ENST00000324862 XRCC2O43543 280 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 PLAUP00749 431 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 MALLQ13021 153 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 CEP78Q5JTW2 689 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 TMEM108Q6UXF1 575 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 SEMA6DQ8NFY4 1073 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 KLF14Q8TD94 323 aaPredicted RBP13.12□□□□□ -0.31
PRPF3-201ENST00000324862 MARS2Q96GW9 593 aaKnown RBP13.12□□□□□ -0.31
PRPF3-201ENST00000324862 OR10A4Q9H209 315 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 RHBDD3Q9Y3P4 386 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 HCFC1P51610 2035 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 TRIM64BA6NI03 449 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 ICMTO60725 284 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 AGAP20933 346 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 GALP22466 123 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 SLC22A25Q6T423 547 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 USP43Q70EL4 1123 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 DYNC2LI1Q8TCX1 351 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 PMF1-BGLAPU3KQ54 211 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 PLCE1Q9P212 2302 aa13.12□□□□□ -0.31
PRPF3-201ENST00000324862 IGKV1-9A0A0C4DH69 117 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 CD2P06729 351 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 PPP3CBP16298 524 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 ZNF20P17024 532 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 SORDQ00796 357 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 PSG7Q13046 419 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 OR8B8Q15620 311 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 UBE2V2Q15819 145 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 LRRTM1Q86UE6 522 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 USB1Q9BQ65 265 aaKnown RBP13.11□□□□□ -0.31
PRPF3-201ENST00000324862 GPR173Q9NS66 373 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 ICE1Q9Y2F5 2266 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 ARL6IP5O75915 188 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 RBMXP38159 391 aaKnown RBP13.11□□□□□ -0.31
PRPF3-201ENST00000324862 NKX6-1P78426 367 aaPredicted RBP13.11□□□□□ -0.31
PRPF3-201ENST00000324862 PARP16Q8N5Y8 322 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 KBTBD8Q8NFY9 601 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 AKAP1Q92667 903 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRPF3-201ENST00000324862 LRRC46Q96FV0 321 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 SP140LQ9H930 580 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 TCF7L1Q9HCS4 588 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 MYEF2Q9P2K5 600 aaKnown RBP13.11□□□□□ -0.31
PRPF3-201ENST00000324862 GPR160Q9UJ42 338 aa13.11□□□□□ -0.31
PRPF3-201ENST00000324862 ABCA4P78363 2273 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 A0A0B4J203 849 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 GGT3PA6NGU5 568 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 CD300LBA8K4G0 201 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 SLC2A2P11168 524 aaPredicted RBP13.1□□□□□ -0.31
PRPF3-201ENST00000324862 IGFBP3P17936 291 aaPredicted RBP13.1□□□□□ -0.31
PRPF3-201ENST00000324862 PTAFRP25105 342 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 MAPK3P27361 379 aaPredicted RBP13.1□□□□□ -0.31
PRPF3-201ENST00000324862 RAD52P43351 418 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 HNRNPA0Q13151 305 aaKnown RBP13.1□□□□□ -0.31
PRPF3-201ENST00000324862 SERPINA12Q8IW75 414 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 DMRTC2Q8IXT2 367 aaPredicted RBP13.1□□□□□ -0.31
PRPF3-201ENST00000324862 PIGCQ92535 297 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 RGCCQ9H4X1 137 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 DUSP13Q9UII6 198 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 A0A0G2JK05 382 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 WIPF3A6NGB9 483 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 MTRF1O75570 445 aaKnown RBP13.1□□□□□ -0.31
PRPF3-201ENST00000324862 MYL9P24844 172 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 THBS4P35443 961 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 NCMAPQ5T1S8 102 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 Q6ZSR3 168 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 OR52N4Q8NGI2 321 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 OR5L1Q8NGL2 311 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 TRMT10AQ8TBZ6 339 aaKnown RBP13.1□□□□□ -0.31
PRPF3-201ENST00000324862 TMEM171Q8WVE6 324 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 BCL7BQ9BQE9 202 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 SYT3Q9BQG1 590 aa13.1□□□□□ -0.31
PRPF3-201ENST00000324862 CGGBP1Q9UFW8 167 aaPredicted RBP13.1□□□□□ -0.31
PRPF3-201ENST00000324862 IGHV3-64DA0A0J9YX35 117 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 ZNF850A8MQ14 1090 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 DEFB108AA8MXU0 73 aa13.09□□□□□ -0.31
PRPF3-201ENST00000324862 PLA2G2AP14555 144 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms