RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 ZNF648Q5T619 568 aaPredicted RBP8.88□□□□□ -0.99
COL12A1-201ENST00000322507 MRPL2Q5T653 305 aaKnown RBP8.88□□□□□ -0.99
COL12A1-201ENST00000322507 PIP5KL1Q5T9C9 394 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 MANBALQ9NQG1 85 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 PTGDR2Q9Y5Y4 395 aa8.88□□□□□ -0.99
COL12A1-201ENST00000322507 H3BML4 177 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 CYBAP13498 195 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 JUNBP17275 347 aaPredicted RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 PSMB6P28072 239 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 C18orf21Q32NC0 220 aaPredicted RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 CLEC18BQ6UXF7 455 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 FAM71F1Q96KD3 344 aaPredicted RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 BARHL1Q9BZE3 327 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 GPR62Q9BZJ7 368 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 RIMS4Q9H426 269 aaPredicted RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 SLCO3A1Q9UIG8 710 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 TSPAN12O95859 305 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 ZNF93P35789 620 aaPredicted RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 FCRL6Q6DN72 434 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 SFXN4Q6P4A7 337 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 ZFP41Q8N8Y5 198 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 MSLNLQ96KJ4 702 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 M0R3E3 92 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 FCARP24071 287 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 FAM3BP58499 235 aaPredicted RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 POU3F1Q03052 451 aaPredicted RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 FAM109BQ6ICB4 259 aaPredicted RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 IL22RA2Q969J5 263 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 GMLQ99445 158 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 OBP2BQ9NPH6 170 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 MRPS2Q9Y399 296 aaKnown RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 DOCK3Q8IZD9 2030 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 PRICKLE3O43900 615 aaPredicted RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 TIMP2P16035 220 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 EMP3P54852 163 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 SLC35B1P78383 322 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 C19orf57Q0VDD7 668 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 FAM209AQ5JX71 171 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 RHBDD2Q6NTF9 364 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 PWWP2BQ6NUJ5 590 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 SLC39A5Q6ZMH5 540 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 RTP3Q9BQQ7 232 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 EIF4E2O60573 245 aaKnown RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 NDUFC2O95298 119 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 RBM11P57052 281 aaKnown RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 UBE2L3P68036 154 aaKnown RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 FZD2Q14332 565 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 SLC35B4Q969S0 331 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 SLC25A46Q96AG3 418 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 CDC42EP3Q9UKI2 254 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 OR5B21A6NL26 309 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 SLCO2B1O94956 709 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 NPY4RP50391 375 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 SRSF4Q08170 494 aaKnown RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 C1orf220Q5T0J3 134 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 ZNF480Q8WV37 535 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 PLEKHF2Q9H8W4 249 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 CACNG4Q9UBN1 327 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 PSORS1C1Q9UIG5 152 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 CNOT1A5YKK6 2376 aaKnown RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 ZDBF2Q9HCK1 2354 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 TLCD2A6NGC4 264 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 SLC35E2P0CK97 266 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 CD38P28907 300 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 BRS3P32247 399 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 MS4A2Q01362 244 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 TEX101Q9BY14 249 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 RHBDD3Q9Y3P4 386 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 SIPA1L3O60292 1781 aaPredicted RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 SRYQ05066 204 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 CD226Q15762 336 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 SPATA45Q537H7 98 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 SIAH3Q8IW03 269 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 CELF2-AS1Q8N7Q2 184 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 OR5D13Q8NGL4 314 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 BOCQ9BWV1 1114 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 ADAMTS5Q9UNA0 930 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 TRIOBPQ9H2D6 2365 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 AKR1C3P42330 323 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 GNG4P50150 75 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 PIGFQ07326 219 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 PRICKLE4Q2TBC4 344 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 FAM71F2Q6NXP2 309 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 TMEM182Q6ZP80 229 aaPredicted RBP8.87□□□□□ -0.99
COL12A1-201ENST00000322507 CAMKMTQ7Z624 323 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 ADOQ96SZ5 270 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 TBX21Q9UL17 535 aa8.87□□□□□ -0.99
COL12A1-201ENST00000322507 DCDP81605 110 aaKnown RBP8.86□□□□□ -0.99
COL12A1-201ENST00000322507 TMEM123Q8N131 208 aa8.86□□□□□ -0.99
COL12A1-201ENST00000322507 OR52E1Q8NGJ3 308 aa8.86□□□□□ -0.99
COL12A1-201ENST00000322507 SLC35A4Q96G79 324 aa8.86□□□□□ -0.99
COL12A1-201ENST00000322507 SNX22Q96L94 193 aa8.86□□□□□ -0.99
COL12A1-201ENST00000322507 PQLC2LA1A4F0 135 aa8.86□□□□□ -0.99
COL12A1-201ENST00000322507 PCNX2A6NKB5 2137 aa8.86□□□□□ -0.99
COL12A1-201ENST00000322507 ANKRD34CP0C6C1 535 aa8.86□□□□□ -0.99
COL12A1-201ENST00000322507 VIPR2P41587 438 aa8.86□□□□□ -0.99
COL12A1-201ENST00000322507 DLX1P56177 255 aa8.86□□□□□ -0.99
COL12A1-201ENST00000322507 FBXO46Q6PJ61 603 aaPredicted RBP8.86□□□□□ -0.99
COL12A1-201ENST00000322507 DNASE2BQ8WZ79 361 aa8.86□□□□□ -0.99
COL12A1-201ENST00000322507 OR2A14Q96R47 310 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms