RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 HLA-HP01893 362 aa15.52■□□□□ 0.07
RAB39A-201ENST00000320578 CD3GP09693 182 aa15.52■□□□□ 0.07
RAB39A-201ENST00000320578 GSTT2BP0CG30 244 aa15.52■□□□□ 0.07
RAB39A-201ENST00000320578 SLC6A1P30531 599 aa15.52■□□□□ 0.07
RAB39A-201ENST00000320578 GSK3AP49840 483 aa15.52■□□□□ 0.07
RAB39A-201ENST00000320578 RAB1AP62820 205 aa15.52■□□□□ 0.07
RAB39A-201ENST00000320578 SSBP1Q04837 148 aaKnown RBP15.52■□□□□ 0.07
RAB39A-201ENST00000320578 PLP2Q04941 152 aa15.52■□□□□ 0.07
RAB39A-201ENST00000320578 KLF9Q13886 244 aaPredicted RBP15.52■□□□□ 0.07
RAB39A-201ENST00000320578 hCG_38984A0A1B0GV85 526 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 METTL21EPA6NDL7 271 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 ORC5O43913 435 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 SERPINA5P05154 406 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 CRHP06850 196 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 TMIGD3P0DMS9 266 aaPredicted RBP15.51■□□□□ 0.07
RAB39A-201ENST00000320578 GDNFP39905 211 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 OR8B8Q15620 311 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 EIF2S3LQ2VIR3 472 aaKnown RBP15.51■□□□□ 0.07
RAB39A-201ENST00000320578 PLEKHN1Q494U1 663 aaPredicted RBP15.51■□□□□ 0.07
RAB39A-201ENST00000320578 C9orf135Q5VTT2 229 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 TMEM42Q69YG0 159 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 PLET1Q6UQ28 207 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 Q6ZT83 130 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 KRT74Q7RTS7 529 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 CELF2-AS1Q8N7Q2 184 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 OR52I2Q8NH67 350 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 SPSB1Q96BD6 273 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 NEURL2Q9BR09 285 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 ATG5Q9H1Y0 275 aa15.51■□□□□ 0.07
RAB39A-201ENST00000320578 LOC100509620A0A075B734 347 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 MBD3L4A6NDZ8 208 aaPredicted RBP15.5■□□□□ 0.07
RAB39A-201ENST00000320578 MBD3L3A6NE82 208 aaPredicted RBP15.5■□□□□ 0.07
RAB39A-201ENST00000320578 NAP1L6A6NFF2 107 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 MBD3L5A6NJ08 208 aaPredicted RBP15.5■□□□□ 0.07
RAB39A-201ENST00000320578 TMEM14DPA8MWL7 114 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 STOMP27105 288 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 KIR2DL2P43627 348 aaPredicted RBP15.5■□□□□ 0.07
RAB39A-201ENST00000320578 BIVMQ86UB2 503 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 ANGPTL5Q86XS5 388 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 C9orf106Q8NAJ2 232 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 MBD3L2Q8NHZ7 208 aaPredicted RBP15.5■□□□□ 0.07
RAB39A-201ENST00000320578 CPNE2Q96FN4 548 aaPredicted RBP15.5■□□□□ 0.07
RAB39A-201ENST00000320578 POM121L2Q96KW2 1035 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 TECTBQ96PL2 329 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 WDR1O75083 606 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 HCKP08631 526 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 HOXD4P09016 255 aaPredicted RBP15.5■□□□□ 0.07
RAB39A-201ENST00000320578 CD79AP11912 226 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 FAHP16930 419 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 UCNP55089 124 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 UBE2V2Q15819 145 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 TBR1Q16650 682 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 TBRG1Q3YBR2 411 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 PLA1AQ53H76 456 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 PAQR4Q8N4S7 273 aaPredicted RBP15.5■□□□□ 0.07
RAB39A-201ENST00000320578 PNLDC1Q8NA58 520 aaKnown RBP15.5■□□□□ 0.07
RAB39A-201ENST00000320578 C1orf162Q8NEQ5 155 aaPredicted RBP15.5■□□□□ 0.07
RAB39A-201ENST00000320578 OR5M9Q8NGP3 310 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 APOBEC3DQ96AK3 386 aaPredicted RBP15.5■□□□□ 0.07
RAB39A-201ENST00000320578 MARVELD1Q9BSK0 173 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 OPA3Q9H6K4 179 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 SCPEP1Q9HB40 452 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 PLSCR4Q9NRQ2 329 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 COPZ2Q9P299 210 aa15.5■□□□□ 0.07
RAB39A-201ENST00000320578 MRPS28Q9Y2Q9 187 aaKnown RBP15.5■□□□□ 0.07
RAB39A-201ENST00000320578 ZNF503-AS2A6NEH8 195 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 H7C417 338 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 J3QW42 95 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 K7EM74 188 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 VSIG8P0DPA2 414 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 NAT2P11245 290 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 EDN3P14138 238 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 PRKACBP22694 351 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 ACKR3P25106 362 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 FAM3AP98173 230 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 CNN3Q15417 329 aaKnown RBP15.49■□□□□ 0.07
RAB39A-201ENST00000320578 GSG1Q2KHT4 349 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 AWAT2Q6E213 333 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 CDH24Q86UP0 819 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 KCNG3Q8TAE7 436 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 CREB3L1Q96BA8 519 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 ABHD17AQ96GS6 310 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 C1orf147Q96MC9 270 aaPredicted RBP15.49■□□□□ 0.07
RAB39A-201ENST00000320578 AUNIPQ9H7T9 357 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 TAS2R8Q9NYW2 309 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 MTFP1Q9UDX5 166 aa15.49■□□□□ 0.07
RAB39A-201ENST00000320578 TRAV18A0A075B6X5 111 aa15.48■□□□□ 0.07
RAB39A-201ENST00000320578 ANKRD20A5PA0PJZ0 165 aa15.48■□□□□ 0.07
RAB39A-201ENST00000320578 CHRM2P08172 466 aa15.48■□□□□ 0.07
RAB39A-201ENST00000320578 PMPCAQ10713 525 aa15.48■□□□□ 0.07
RAB39A-201ENST00000320578 TNK1Q13470 666 aa15.48■□□□□ 0.07
RAB39A-201ENST00000320578 KISS1Q15726 138 aa15.48■□□□□ 0.07
RAB39A-201ENST00000320578 CLVS2Q5SYC1 327 aa15.48■□□□□ 0.07
RAB39A-201ENST00000320578 AGAP6Q5VW22 663 aa15.48■□□□□ 0.07
RAB39A-201ENST00000320578 ZNF324BQ6AW86 544 aaPredicted RBP15.48■□□□□ 0.07
RAB39A-201ENST00000320578 OR2AE1Q8NHA4 323 aa15.48■□□□□ 0.07
RAB39A-201ENST00000320578 FAM46BQ96A09 425 aa15.48■□□□□ 0.07
RAB39A-201ENST00000320578 ZNF75AQ96N20 296 aa15.48■□□□□ 0.07
RAB39A-201ENST00000320578 MMP28Q9H239 520 aa15.48■□□□□ 0.07
RAB39A-201ENST00000320578 KCNK15Q9H427 330 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms