RNA–Protein interactions for RNA: ENST00000311008.15

SPNS1-201, Transcript of sphingolipid transporter 1 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPNS1, Length 2,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-201ENST00000311008 KCNRGQ8N5I3 272 aa17.25■□□□□ 0.35
SPNS1-201ENST00000311008 PAQR8Q8TEZ7 354 aa17.25■□□□□ 0.35
SPNS1-201ENST00000311008 SSC4DQ8WTU2 575 aa17.25■□□□□ 0.35
SPNS1-201ENST00000311008 FSCN3Q9NQT6 498 aa17.25■□□□□ 0.35
SPNS1-201ENST00000311008 A0A0U1RQV5 110 aa17.25■□□□□ 0.35
SPNS1-201ENST00000311008 DUS4LO95620 317 aaKnown RBP17.25■□□□□ 0.35
SPNS1-201ENST00000311008 IGLV3-1P01715 115 aa17.25■□□□□ 0.35
SPNS1-201ENST00000311008 PRF1P14222 555 aa17.25■□□□□ 0.35
SPNS1-201ENST00000311008 HOGA1Q86XE5 327 aa17.25■□□□□ 0.35
SPNS1-201ENST00000311008 NTNG2Q96CW9 530 aa17.25■□□□□ 0.35
SPNS1-201ENST00000311008 NICN1Q9BSH3 213 aa17.25■□□□□ 0.35
SPNS1-201ENST00000311008 SLC25A32Q9H2D1 315 aa17.25■□□□□ 0.35
SPNS1-201ENST00000311008 TNFSF18Q9UNG2 199 aa17.25■□□□□ 0.35
SPNS1-201ENST00000311008 NPIPA2E9PIF3 369 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 NPIPA3F8WFD2 350 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 THBS4P35443 961 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 ALDH3B1P43353 468 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 OR3A4PP47883 348 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 TMEM104Q8NE00 496 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 SCGB3A2Q96PL1 93 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 SPACA5Q96QH8 159 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 OCSTAMPQ9BR26 566 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 ZNF160Q9HCG1 818 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 ZNF230Q9UIE0 474 aaPredicted RBP17.24■□□□□ 0.35
SPNS1-201ENST00000311008 PHF3Q92576 2039 aaKnown RBP17.24■□□□□ 0.35
SPNS1-201ENST00000311008 PRUNE2Q8WUY3 3088 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 KANTRA0A1W2PQU2 76 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 OR2AT4A6NND4 320 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 KRBOX1C9JBD0 128 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 NTN3O00634 580 aaPredicted RBP17.24■□□□□ 0.35
SPNS1-201ENST00000311008 EFSO43281 561 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 CFIP05156 583 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 SLC22A6Q4U2R8 563 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 RAET1LQ5VY80 246 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 TERB2Q8NHR7 220 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 FBXW5Q969U6 566 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 C10orf35Q96D05 121 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 DKKL1Q9UK85 242 aa17.24■□□□□ 0.35
SPNS1-201ENST00000311008 LOC100509620A0A075B734 347 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 A0A0A6YYD4 124 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 KLF7O75840 302 aaPredicted RBP17.23■□□□□ 0.35
SPNS1-201ENST00000311008 MC2RQ01718 297 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 OR2Y1Q8NGV0 311 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 PP6455Q8WZ26 134 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 SOX7Q9BT81 388 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 SH2D2AQ9NP31 389 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.23■□□□□ 0.35
SPNS1-201ENST00000311008 KCNMB2Q9Y691 235 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 LAMA1P25391 3075 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 GJE1A6NN92 205 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 CRTAPO75718 401 aaPredicted RBP17.23■□□□□ 0.35
SPNS1-201ENST00000311008 PMP2P02689 132 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 CELA2AP08217 269 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 CCL3P10147 92 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 KLK2P20151 261 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 HIST1H3AP68431 136 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 ARL6IP1Q15041 203 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 PLAC9Q5JTB6 97 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 HIST2H3PS2Q5TEC6 136 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 ACOT7LQ6ZUV0 252 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 HIST2H3AQ71DI3 136 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 HSD17B13Q7Z5P4 300 aaPredicted RBP17.23■□□□□ 0.35
SPNS1-201ENST00000311008 FAM89BQ8N5H3 189 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 EIF4E3Q8N5X7 224 aaKnown RBP17.23■□□□□ 0.35
SPNS1-201ENST00000311008 TMEM156Q8N614 296 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 PPP1R1CQ8WVI7 109 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 CCDC120Q96HB5 630 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 CXorf58Q96LI9 332 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 OR10A2Q9H208 303 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 FBXO9Q9UK97 447 aaPredicted RBP17.23■□□□□ 0.35
SPNS1-201ENST00000311008 HS3ST3B1Q9Y662 390 aa17.23■□□□□ 0.35
SPNS1-201ENST00000311008 CEACAM18A8MTB9 384 aa17.22■□□□□ 0.35
SPNS1-201ENST00000311008 SOCS1O15524 211 aa17.22■□□□□ 0.35
SPNS1-201ENST00000311008 DHHO43323 396 aa17.22■□□□□ 0.35
SPNS1-201ENST00000311008 DNPH1O43598 174 aa17.22■□□□□ 0.35
SPNS1-201ENST00000311008 ZIC3O60481 467 aa17.22■□□□□ 0.35
SPNS1-201ENST00000311008 DHRS3O75911 302 aa17.22■□□□□ 0.35
SPNS1-201ENST00000311008 SPDEFO95238 335 aa17.22■□□□□ 0.35
SPNS1-201ENST00000311008 SUCLG1P53597 346 aaKnown RBP17.22■□□□□ 0.35
SPNS1-201ENST00000311008 RAC1P63000 192 aa17.22■□□□□ 0.35
SPNS1-201ENST00000311008 ZFP36L1Q07352 338 aaKnown RBP17.22■□□□□ 0.35
SPNS1-201ENST00000311008 ENDOGQ14249 297 aaKnown RBP17.22■□□□□ 0.35
SPNS1-201ENST00000311008 GFOD2Q3B7J2 385 aa17.22■□□□□ 0.35
SPNS1-201ENST00000311008 Q6ZSR3 168 aa17.22■□□□□ 0.35
SPNS1-201ENST00000311008 RPS19BP1Q86WX3 136 aaKnown RBP17.22■□□□□ 0.35
SPNS1-201ENST00000311008 OR9K2Q8NGE7 335 aa17.22■□□□□ 0.35
SPNS1-201ENST00000311008 ST8SIA2Q92186 375 aa17.22■□□□□ 0.35
SPNS1-201ENST00000311008 ST8SIA4Q92187 359 aa17.22■□□□□ 0.35
SPNS1-201ENST00000311008 GNRHR2Q96P88 292 aa17.22■□□□□ 0.35
SPNS1-201ENST00000311008 V9GYS6 101 aa17.22■□□□□ 0.35
SPNS1-201ENST00000311008 IGKV1-9A0A0C4DH69 117 aa17.21■□□□□ 0.35
SPNS1-201ENST00000311008 A8MXK9 166 aa17.21■□□□□ 0.35
SPNS1-201ENST00000311008 MFNGO00587 321 aa17.21■□□□□ 0.35
SPNS1-201ENST00000311008 MTRF1O75570 445 aaKnown RBP17.21■□□□□ 0.35
SPNS1-201ENST00000311008 CBR3O75828 277 aa17.21■□□□□ 0.35
SPNS1-201ENST00000311008 LIPCP11150 499 aa17.21■□□□□ 0.35
SPNS1-201ENST00000311008 VAMP1P23763 118 aa17.21■□□□□ 0.35
SPNS1-201ENST00000311008 ZNF84P51523 738 aa17.21■□□□□ 0.35
SPNS1-201ENST00000311008 TMEM128Q5BJH2 165 aa17.21■□□□□ 0.35
SPNS1-201ENST00000311008 TMEM123Q8N131 208 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms