RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 LMX1BO60663 402 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 TMCC2O75069 709 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 SULT1C4O75897 302 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 RPP14O95059 124 aaKnown RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 FADS2O95864 444 aaKnown RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 TTRP02766 147 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 LCATP04180 440 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 LCKP06239 509 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 CDK1P06493 297 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 OR4A8P0C604 315 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 CCDC159P0C7I6 412 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 CD53P19397 219 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 KITLGP21583 273 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 ACKR3P25106 362 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 DCKP27707 260 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 APOBEC3AP31941 199 aaPredicted RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 DCTDP32321 178 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 TTKP33981 857 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 RBMXP38159 391 aaKnown RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 SLC6A9P48067 706 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 RGS6P49758 472 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 GTF2A1P52655 376 aaPredicted RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 RIDAP52758 137 aaKnown RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 TPTEP56180 551 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 RPL11P62913 178 aaKnown RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 PSG7Q13046 419 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 GK2Q14410 553 aaPredicted RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 EFNB3Q15768 340 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 KLHL22Q53GT1 634 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 SPRNQ5BIV9 151 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 WDR38Q5JTN6 314 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 OR2G6Q5TZ20 316 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 LIPNQ5VXI9 398 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 RNLSQ5VYX0 342 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 RGS7BPQ6MZT1 257 aaPredicted RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 ZNF544Q6NX49 715 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 KCTD18Q6PI47 426 aaPredicted RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 DEGS2Q6QHC5 323 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 DRAM2Q6UX65 266 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 FBXW12Q6X9E4 464 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 FAM57BQ71RH2 274 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 KRT77Q7Z794 578 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 ZCCHC24Q8N2G6 241 aaKnown RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 ZNF786Q8N393 782 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 YIPF7Q8N8F6 280 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 OR10AC1Q8NH08 325 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 KLF14Q8TD94 323 aaPredicted RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 SPRYD4Q8WW59 207 aaPredicted RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 RGP1Q92546 391 aaPredicted RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 SPTSSAQ969W0 71 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 MRPL24Q96A35 216 aaKnown RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 SPSB4Q96A44 273 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 APOBEC3DQ96AK3 386 aaPredicted RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 SGK3Q96BR1 496 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 TMEM80Q96HE8 168 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 C4orf36Q96KX1 117 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 OR5M11Q96RB7 305 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 KCNS3Q9BQ31 491 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 BCL2L14Q9BZR8 327 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 PBOV1Q9GZY1 135 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 PLK3Q9H4B4 646 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 PPP1R3EQ9H7J1 279 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 INPP5EQ9NRR6 644 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 NUFIP1Q9UHK0 495 aaKnown RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 ST6GALNAC2Q9UJ37 374 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 GNG8Q9UK08 70 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 IKZF2Q9UKS7 526 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 PLEKHA6Q9Y2H5 1048 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 TMEM14AQ9Y6G1 99 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 R4GMQ9 66 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 HIVEP1P15822 2718 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 CSPG4Q6UVK1 2322 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 TMEM269A0A1B0GVZ9 245 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 A0A1B0GWJ7 208 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 ZSCAN5BA6NJL1 495 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 SNTNA6NMZ2 147 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 OR4C45A6NMZ5 311 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 PTGES3LE9PB15 166 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 H3BSA7 217 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 J3QLW9 94 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 MLNRO43193 412 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 NDUFS7O75251 213 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 ZNF254O75437 659 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 NCR1O76036 304 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 IGHV3-13P01766 116 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 KRT8P05787 483 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 ANXA2P07355 339 aaKnown RBP5.02□□□□□ -1.61
SSX3-201ENST00000298396 ZNF19P17023 458 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 NAT1P18440 290 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 PCMT1P22061 227 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 CCL1P22362 96 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 HSD11B1P28845 292 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 ATP6V1E1P36543 226 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 SERPINF1P36955 418 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 CDKN1AP38936 164 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 RAD52P43351 418 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 ALDH3B1P43353 468 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 MAGEB1P43366 347 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 MAP2K4P45985 399 aa5.02□□□□□ -1.61
SSX3-201ENST00000298396 FABP6P51161 128 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms