RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 ZNF92Q03936 586 aa19.83■□□□□ 0.77
PTX3-201ENST00000295927 GABRA6Q16445 453 aa19.83■□□□□ 0.77
PTX3-201ENST00000295927 PP6455Q8WZ26 134 aa19.83■□□□□ 0.77
PTX3-201ENST00000295927 ZFP3Q96NJ6 502 aa19.83■□□□□ 0.77
PTX3-201ENST00000295927 PROCRQ9UNN8 238 aa19.83■□□□□ 0.77
PTX3-201ENST00000295927 DHRS7CA6NNS2 312 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 XRCC2O43543 280 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 CGAP01215 116 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 COX5AP20674 150 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 ZNF93P35789 620 aaPredicted RBP19.82■□□□□ 0.76
PTX3-201ENST00000295927 C3P1Q6ZMU1 363 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 RNF144BQ7Z419 303 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 GABRG1Q8N1C3 465 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 ZNF610Q8N9Z0 462 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 MS4A3Q96HJ5 214 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 ZNF75AQ96N20 296 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 SPACA5Q96QH8 159 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 CHST5Q9GZS9 411 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 CRHP06850 196 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 HCKP08631 526 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 CDK2P24941 298 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 PRSS12P56730 875 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 TNK1Q13470 666 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 TSC22D1Q15714 1073 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 UTS2BQ765I0 119 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 GDPD3Q7L5L3 318 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 NAXEQ8NCW5 288 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 C19orf18Q8NEA5 215 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 AKAP1Q92667 903 aaKnown RBP eCLIP19.82■□□□□ 0.76
PTX3-201ENST00000295927 THAP7Q9BT49 309 aaPredicted RBP19.82■□□□□ 0.76
PTX3-201ENST00000295927 OPN3Q9H1Y3 402 aaPredicted RBP19.82■□□□□ 0.76
PTX3-201ENST00000295927 TUBD1Q9UJT1 453 aa19.82■□□□□ 0.76
PTX3-201ENST00000295927 ALDOBP05062 364 aa19.81■□□□□ 0.76
PTX3-201ENST00000295927 HOXD11P31277 338 aaPredicted RBP19.81■□□□□ 0.76
PTX3-201ENST00000295927 APLNRP35414 380 aa19.81■□□□□ 0.76
PTX3-201ENST00000295927 MAP2K3P46734 347 aa19.81■□□□□ 0.76
PTX3-201ENST00000295927 UBE2NP61088 152 aaKnown RBP19.81■□□□□ 0.76
PTX3-201ENST00000295927 FAM3AP98173 230 aa19.81■□□□□ 0.76
PTX3-201ENST00000295927 RIPPLY1Q0D2K3 151 aa19.81■□□□□ 0.76
PTX3-201ENST00000295927 UBE2V2Q15819 145 aa19.81■□□□□ 0.76
PTX3-201ENST00000295927 DMRTC1Q5HYR2 192 aa19.81■□□□□ 0.76
PTX3-201ENST00000295927 CDH26Q8IXH8 852 aa19.81■□□□□ 0.76
PTX3-201ENST00000295927 CCDC36Q8IYA8 594 aa19.81■□□□□ 0.76
PTX3-201ENST00000295927 SPSB4Q96A44 273 aa19.81■□□□□ 0.76
PTX3-201ENST00000295927 SNRNP40Q96DI7 357 aaKnown RBP19.81■□□□□ 0.76
PTX3-201ENST00000295927 SLX1AQ9BQ83 275 aa19.81■□□□□ 0.76
PTX3-201ENST00000295927 RABL2AQ9UBK7 228 aaPredicted RBP19.81■□□□□ 0.76
PTX3-201ENST00000295927 RABL2BQ9UNT1 228 aa19.81■□□□□ 0.76
PTX3-201ENST00000295927 MYO7BQ6PIF6 2116 aa19.81■□□□□ 0.76
PTX3-201ENST00000295927 hCG_38984A0A1B0GV85 526 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 EEF1E1O43324 174 aaKnown RBP19.8■□□□□ 0.76
PTX3-201ENST00000295927 LANCL1O43813 399 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 IL2RAP01589 272 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 SPNP16150 400 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 TIMP3P35625 211 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 GSK3AP49840 483 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 MMP15P51511 669 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 ASAH1Q13510 395 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 TMEM69Q5SWH9 247 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 BIVMQ86UB2 503 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 SSC4DQ8WTU2 575 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 RFT1Q96AA3 541 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 A0A1W2PR80 420 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 LDLRAD4O15165 306 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 CTDSPLO15194 276 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 PLA2G10O15496 165 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 CTAG2O75638 210 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 ALX3O95076 343 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 SERPINA5P05154 406 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 HOXD4P09016 255 aaPredicted RBP19.8■□□□□ 0.76
PTX3-201ENST00000295927 PRF1P14222 555 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 PTH2RP49190 550 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 EIF2S3LQ2VIR3 472 aaKnown RBP19.8■□□□□ 0.76
PTX3-201ENST00000295927 PRR30Q53SZ7 412 aaPredicted RBP19.8■□□□□ 0.76
PTX3-201ENST00000295927 TRIM63Q969Q1 353 aa19.8■□□□□ 0.76
PTX3-201ENST00000295927 APOBEC3DQ96AK3 386 aaPredicted RBP19.8■□□□□ 0.76
PTX3-201ENST00000295927 MYEF2Q9P2K5 600 aaKnown RBP19.8■□□□□ 0.76
PTX3-201ENST00000295927 SSX4O60224 188 aa19.79■□□□□ 0.76
PTX3-201ENST00000295927 DGCR2P98153 550 aa19.79■□□□□ 0.76
PTX3-201ENST00000295927 NPRL2Q8WTW4 380 aa19.79■□□□□ 0.76
PTX3-201ENST00000295927 BOD1Q96IK1 185 aa19.79■□□□□ 0.76
PTX3-201ENST00000295927 HOXB1P14653 301 aaPredicted RBP19.78■□□□□ 0.76
PTX3-201ENST00000295927 INPP1P49441 399 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 CAPZA1P52907 286 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 OR8B8Q15620 311 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 RNASE12Q5GAN4 147 aaKnown RBP19.78■□□□□ 0.76
PTX3-201ENST00000295927 OR10K2Q6IF99 312 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 GFRALQ6UXV0 394 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 ANGPTL5Q86XS5 388 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 PAQR4Q8N4S7 273 aaPredicted RBP19.78■□□□□ 0.76
PTX3-201ENST00000295927 C1orf162Q8NEQ5 155 aaPredicted RBP19.78■□□□□ 0.76
PTX3-201ENST00000295927 SLC30A7Q8NEW0 376 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 C11orf54Q9H0W9 315 aaPredicted RBP19.78■□□□□ 0.76
PTX3-201ENST00000295927 ASF1BQ9NVP2 202 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 FAIMQ9NVQ4 179 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 XRCC3O43542 346 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 BPNT1O95861 308 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 ZNF14P17017 642 aaPredicted RBP19.78■□□□□ 0.76
PTX3-201ENST00000295927 TAS2R20P59543 309 aa19.78■□□□□ 0.76
PTX3-201ENST00000295927 UNQ6494/PRO21346Q6UXR6 183 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms