RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 SNHG28P0DPA3 235 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 CCKARP32238 428 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 APOBEC1P41238 236 aaKnown RBP11.27□□□□□ -0.61
SLX4-201ENST00000294008 LOXL3P58215 753 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 SHHQ15465 462 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 SSX1Q16384 188 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 ELFN2Q5R3F8 820 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 SIAH3Q8IW03 269 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 C12orf42Q96LP6 360 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 ZDHHC5Q9C0B5 715 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 GPR84Q9NQS5 396 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 LAMP3Q9UQV4 416 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 PAPLNO95428 1278 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 PPP1R17O96001 155 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 CD3EP07766 207 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 SRMP19623 302 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 FOXK2Q01167 660 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 RPUSD3Q6P087 351 aaKnown RBP11.27□□□□□ -0.61
SLX4-201ENST00000294008 LRRTM3Q86VH5 581 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 KLF16Q9BXK1 252 aaPredicted RBP11.27□□□□□ -0.61
SLX4-201ENST00000294008 LOXHD1Q8IVV2 1947 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 DNAJC25-GNG10A0A024R161 153 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 LOC389332A0A1B0GUA5 103 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 PRLHRP49683 370 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 Q96M85 177 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 ASB16Q96NS5 453 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 ALKBH3Q96Q83 286 aaPredicted RBP11.27□□□□□ -0.61
SLX4-201ENST00000294008 FBLL1A6NHQ2 334 aaKnown RBP11.27□□□□□ -0.61
SLX4-201ENST00000294008 CEACAM6P40199 344 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 RPL27P61353 136 aaKnown RBP11.27□□□□□ -0.61
SLX4-201ENST00000294008 SOWAHCQ53LP3 525 aaPredicted RBP11.27□□□□□ -0.61
SLX4-201ENST00000294008 CD276Q5ZPR3 534 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 TMEM81Q6P7N7 255 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 DPY19L2P2Q6ZN68 376 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 MBOAT2Q6ZWT7 520 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 B3GNT8Q7Z7M8 397 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 SLC39A11Q8N1S5 342 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 SRD5A3Q9H8P0 318 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 ZDHHC18Q9NUE0 388 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 THYN1Q9P016 225 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 NAT8BQ9UHF3 227 aa11.27□□□□□ -0.61
SLX4-201ENST00000294008 ZNF154Q13106 437 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 LRRC26Q2I0M4 334 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 LAX1Q8IWV1 398 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 RAB1CQ92928 201 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 FAM131CQ96AQ9 280 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 PELI1Q96FA3 418 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 MRPL13Q9BYD1 178 aaKnown RBP11.26□□□□□ -0.61
SLX4-201ENST00000294008 SLC25A32Q9H2D1 315 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 PSG11Q9UQ72 335 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 RNF24Q9Y225 148 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 RCL1Q9Y2P8 373 aaKnown RBP11.26□□□□□ -0.61
SLX4-201ENST00000294008 FZD9O00144 591 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 MT-CO3P00414 261 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 SP1P08047 785 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 KIAA1024LP59773 190 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 TRA2BP62995 288 aaKnown RBP11.26□□□□□ -0.61
SLX4-201ENST00000294008 ZNF502Q8TBZ5 544 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 RALYQ9UKM9 306 aaKnown RBP11.26□□□□□ -0.61
SLX4-201ENST00000294008 TUBAL3A6NHL2 446 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 ICOSLGO75144 302 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 RECKO95980 971 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 BRS3P32247 399 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 TMEM211Q6ICI0 200 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 FBXL16Q8N461 479 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 SLC37A2Q8TED4 501 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 IP6K3Q96PC2 410 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 DLC1Q96QB1 1528 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 SHISA8B8ZZ34 492 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 ZNF354AO60765 605 aaPredicted RBP11.26□□□□□ -0.61
SLX4-201ENST00000294008 ZNF441Q8N8Z8 693 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 EGLN2Q96KS0 407 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 PKMYT1Q99640 499 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 WDR13Q9H1Z4 485 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 CDRT15L2A8MXV6 281 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 SOD1P00441 154 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 ADPRHP54922 357 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 ETV3LQ6ZN32 361 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 DOLPP1Q86YN1 238 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 CARFQ8N187 725 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 NTN4Q9HB63 628 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 CORINQ9Y5Q5 1042 aa11.26□□□□□ -0.61
SLX4-201ENST00000294008 CCL2P13500 99 aa11.25□□□□□ -0.61
SLX4-201ENST00000294008 TRMT12Q53H54 448 aaKnown RBP11.25□□□□□ -0.61
SLX4-201ENST00000294008 FFAR4Q5NUL3 377 aa11.25□□□□□ -0.61
SLX4-201ENST00000294008 RFLNAQ6ZTI6 216 aa11.25□□□□□ -0.61
SLX4-201ENST00000294008 NKAIN3Q8N8D7 197 aa11.25□□□□□ -0.61
SLX4-201ENST00000294008 MED29Q9NX70 200 aa11.25□□□□□ -0.61
SLX4-201ENST00000294008 ADAMTS5Q9UNA0 930 aa11.25□□□□□ -0.61
SLX4-201ENST00000294008 LOC107986453A0A1B0GWG9 222 aa11.25□□□□□ -0.61
SLX4-201ENST00000294008 NME1P15531 152 aaKnown RBP11.25□□□□□ -0.61
SLX4-201ENST00000294008 GCSAMLQ5JQS6 135 aa11.25□□□□□ -0.61
SLX4-201ENST00000294008 C19orf48Q6RUI8 117 aa11.25□□□□□ -0.61
SLX4-201ENST00000294008 TOMM20LQ6UXN7 152 aa11.25□□□□□ -0.61
SLX4-201ENST00000294008 RBM45Q8IUH3 476 aaKnown RBP11.25□□□□□ -0.61
SLX4-201ENST00000294008 KLHDC1Q8N7A1 406 aa11.25□□□□□ -0.61
SLX4-201ENST00000294008 RELL2Q8NC24 303 aaPredicted RBP11.25□□□□□ -0.61
SLX4-201ENST00000294008 ST3GAL6Q9Y274 331 aa11.25□□□□□ -0.61
SLX4-201ENST00000294008 CEACAM3P40198 252 aa11.25□□□□□ -0.61
SLX4-201ENST00000294008 ATP6V1FQ16864 119 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms