RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 OR51B6Q9H340 312 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 SLC23A1Q9UHI7 598 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 DAPP1Q9UN19 280 aa10.69□□□□□ -0.7
SYNGAP1-201ENST00000293748 NSG1A0A0A6YYJ2 146 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 ANGPTL7O43827 346 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 CT45A6P0DMU7 189 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 CT45A5P0DMU8 189 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 CT45A7P0DMV0 189 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 CT45A8P0DMV1 189 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 CT45A9P0DMV2 189 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 CD82P27701 267 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 PI4KAP42356 2102 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 LIM2P55344 173 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 C2orf76Q3KRA6 126 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 CT45A2Q5DJT8 189 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 CT45A1Q5HYN5 189 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 FAM74A1Q5RGS3 127 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 ARIH2OSQ8N7S6 290 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR4C16Q8NGL9 310 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 CT45A3Q8NHU0 189 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 A0A1W2PR48 441 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 XRCC3O43542 346 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 TUSC2O75896 110 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 TNFSF15O95150 251 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 PRR35P0CG20 571 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 BTNL8Q6UX41 500 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 FBXW5Q969U6 566 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF2Q9BSG1 426 aaPredicted RBP10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 MEIKINA0A087WXM9 373 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 B3GALT4O96024 378 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 P2RX1P51575 399 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 SLC10A1Q14973 349 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 FAAP20Q6NZ36 180 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 TFAP2EQ6VUC0 442 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 EXD3Q8N9H8 876 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR5AP2Q8NGF4 316 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 LHX4Q969G2 390 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 SEMA6CQ9H3T2 930 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 PIEZO1Q92508 2521 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 TMPRSS11DO60235 418 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 GSTP1P09211 210 aaKnown RBP10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 CALCRP30988 508 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 ELLP55199 621 aaPredicted RBP10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 LINC00303Q3SY05 128 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 C12orf73Q69YU5 71 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR8G2PQ6IF36 304 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 ADGRG3Q86Y34 549 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 BPIFCQ8NFQ6 507 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 VPS25Q9BRG1 176 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF251Q9BRH9 671 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 RHOFQ9HBH0 211 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 PIGLQ9Y2B2 252 aa10.68□□□□□ -0.7
SYNGAP1-201ENST00000293748 J3QR89 54 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 DTYMKP23919 212 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 GPR85P60893 370 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 RANP62826 216 aaKnown RBP10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 TRMT12Q53H54 448 aaKnown RBP10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 FAM162BQ5T6X4 162 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 PLXDC2Q6UX71 529 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 CLEC9AQ6UXN8 241 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 GLCCI1Q86VQ1 547 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 TMEM123Q8N131 208 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 RBMXL3Q8N7X1 1067 aaKnown RBP10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 SCNM1Q9BWG6 230 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 NRSN2Q9GZP1 204 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 TMEM8BA6NDV4 472 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 ICAM2P13598 275 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 ANKRD16Q6P6B7 361 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 CATSPERDQ86XM0 798 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR13C5Q8NGS8 318 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 JAM3Q9BX67 310 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR51I2Q9H344 312 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF814B7Z6K7 855 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 HSPB6O14558 160 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 MBP02144 154 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 SPP1P10451 314 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 RBP2P50120 134 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 EMP3P54852 163 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 NKG7Q16617 165 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 GPX8Q8TED1 209 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 LAMA3Q16787 3333 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 NXPH2O95156 264 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR2T2Q6IF00 324 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 CYHR1Q6ZMK1 362 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 ZNF813Q6ZN06 617 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 SLC16A12Q6ZSM3 486 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 FAM185AQ8N0U4 392 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 TMEM229BQ8NBD8 167 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 NUDCD2Q8WVJ2 157 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 MARVELD1Q9BSK0 173 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 HIF1ANQ9NWT6 349 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 B3GAT1Q9P2W7 334 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 SLC5A6Q9Y289 635 aa10.67□□□□□ -0.7
SYNGAP1-201ENST00000293748 OTOGLQ3ZCN5 2332 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 A0A0B4J203 849 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 PHOX2AO14813 284 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 NDUFB6O95139 128 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 OR8U8P0C7N1 319 aa10.66□□□□□ -0.7
SYNGAP1-201ENST00000293748 GABRA2P47869 451 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms