RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 THOC3Q96J01 351 aaKnown RBP7.93□□□□□ -1.14
NIPBL-201ENST00000282516 TP53RKQ96S44 253 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 OCIAD1Q9NX40 245 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 MYO16Q9Y6X6 1858 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 FANCMQ8IYD8 2048 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 TMEM218A2RU14 115 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 SERPINE3A8MV23 424 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 OR52L2PQ8NGH6 319 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 LRRC15Q8TF66 581 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 C3orf30Q96M34 536 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 OR5M11Q96RB7 305 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 HSPB8Q9UJY1 196 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 CHD3Q12873 2000 aaKnown RBP7.93□□□□□ -1.14
NIPBL-201ENST00000282516 A0A1W2PN81 502 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 TMEM30CPA0ZSE6 113 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 M0QZK8 103 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 GGCTO75223 188 aaKnown RBP7.93□□□□□ -1.14
NIPBL-201ENST00000282516 CHRNA7P36544 502 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 DND1Q8IYX4 353 aaKnown RBP7.93□□□□□ -1.14
NIPBL-201ENST00000282516 MS4A8Q9BY19 250 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 GPR84Q9NQS5 396 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 DSCR3O14972 297 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 JUNBP17275 347 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-201ENST00000282516 CSF2RBP32927 897 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 CCL11P51671 97 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 MYBPHQ13203 477 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 AMMECR1LQ6DCA0 310 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 CAMKMTQ7Z624 323 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 OR4S1Q8NGB4 309 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 C16orf70Q9BSU1 422 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 TINAGL1Q9GZM7 467 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-201ENST00000282516 GLIPR2Q9H4G4 154 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 COA3Q9Y2R0 106 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-201ENST00000282516 A0A1B0GUL6 1792 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 NALCNQ8IZF0 1738 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 A0A1W2PNV4 684 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 M0R082 166 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 SLC25A5P05141 298 aaKnown RBP7.93□□□□□ -1.14
NIPBL-201ENST00000282516 HSF5Q4G112 596 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-201ENST00000282516 OR4A4PQ8NGN8 299 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 OR1L3Q8NH93 324 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 LMO3Q8TAP4 145 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 KIR2DL1P43626 348 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-201ENST00000282516 KIR2DL2P43627 348 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-201ENST00000282516 SNRPNP63162 240 aaKnown RBP7.93□□□□□ -1.14
NIPBL-201ENST00000282516 NKAIN2Q5VXU1 208 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 ZNF343Q6P1L6 599 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 TRAT1Q6PIZ9 186 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 Q6ZNX1 250 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 CHST6Q9GZX3 395 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 C21orf58P58505 322 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 ZNF141Q15928 474 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 GGNBP1Q5YKI7 109 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 SLC48A1Q6P1K1 146 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 CRYAAP02489 173 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 SDHAP31040 664 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 SRSF9Q13242 221 aaKnown RBP eCLIP7.93□□□□□ -1.142e-6■■■■□ 20.8
NIPBL-201ENST00000282516 PLA1AQ53H76 456 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 MRPL37Q9BZE1 423 aaKnown RBP7.93□□□□□ -1.14
NIPBL-201ENST00000282516 NPTNQ9Y639 398 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 PRSS21Q9Y6M0 314 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 CYR61O00622 381 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 TNFRSF1AP19438 455 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 SULT1A1P50225 295 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 RBM14Q96PK6 669 aaKnown RBP7.93□□□□□ -1.14
NIPBL-201ENST00000282516 TMEM191AQ9H0A3 160 aa7.93□□□□□ -1.14
NIPBL-201ENST00000282516 KLF13Q9Y2Y9 288 aaPredicted RBP7.93□□□□□ -1.14
NIPBL-201ENST00000282516 ELOA3CA0A087WX78 387 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-201ENST00000282516 M0R3E3 92 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 TMEM64Q6YI46 380 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 ATOH8Q96SQ7 321 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 ZDHHC5Q9C0B5 715 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 SLC5A6Q9Y289 635 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-201ENST00000282516 INSM2Q96T92 566 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-201ENST00000282516 IL21Q9HBE4 155 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 CLEC2DQ9UHP7 191 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 LOC102724200A0A096LPH7 203 aaPredicted RBP7.92□□□□□ -1.14
NIPBL-201ENST00000282516 DUXBA0A1W2PPF3 345 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 CTNSO60931 367 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 CA3P07451 260 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 CD40P25942 277 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 OPRK1P41145 380 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 UBE2MP61081 183 aaKnown RBP7.92□□□□□ -1.14
NIPBL-201ENST00000282516 REC114Q7Z4M0 266 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 GALNT16Q8N428 558 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 MANBALQ9NQG1 85 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 R4GMQ9 66 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 TMEM238LA0A1B0GVL6 79 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 FITM1A5D6W6 292 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 A6NJY4 79 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 OR4E1P0C645 316 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 NQO2P16083 231 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 LSM11P83369 360 aaKnown RBP eCLIP7.92□□□□□ -1.14
NIPBL-201ENST00000282516 PMP22Q01453 160 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 SELENBP1Q13228 472 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 CORO6Q6QEF8 472 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 PTRH1Q86Y79 214 aaKnown RBP7.92□□□□□ -1.14
NIPBL-201ENST00000282516 SFTPA2Q8IWL1 248 aa7.92□□□□□ -1.14
NIPBL-201ENST00000282516 SFTPA1Q8IWL2 248 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms