RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 NSUN5P2Q63ZY6 315 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 OR2A2Q6IF42 318 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 TMEM53Q6P2H8 277 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 RNF144BQ7Z419 303 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 SEMA6DQ8NFY4 1073 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 ENKURQ8TC29 256 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 ITPKCQ96DU7 683 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 GPR137Q96N19 417 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 FBLN5Q9UBX5 448 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 RBMX2Q9Y388 322 aaKnown RBP19.18■□□□□ 0.66
CCDC7-201ENST00000277657 KDM4BO94953 1096 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 EDN3P14138 238 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 KIR2DL2P43627 348 aaPredicted RBP19.18■□□□□ 0.66
CCDC7-201ENST00000277657 TNK1Q13470 666 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 UBE2V2Q15819 145 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 TBR1Q16650 682 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 TOMM5Q8N4H5 51 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 OR52I2Q8NH67 350 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 GCDHQ92947 438 aaPredicted RBP19.18■□□□□ 0.66
CCDC7-201ENST00000277657 SPSB4Q96A44 273 aa19.18■□□□□ 0.66
CCDC7-201ENST00000277657 RRP8O43159 456 aaKnown RBP19.17■□□□□ 0.66
CCDC7-201ENST00000277657 ORC5O43913 435 aa19.17■□□□□ 0.66
CCDC7-201ENST00000277657 CNOT4O95628 575 aaKnown RBP19.17■□□□□ 0.66
CCDC7-201ENST00000277657 SRP9P49458 86 aaKnown RBP19.17■□□□□ 0.66
CCDC7-201ENST00000277657 HIKESHIQ53FT3 197 aa19.17■□□□□ 0.66
CCDC7-201ENST00000277657 MTFR2Q6P444 385 aa19.17■□□□□ 0.66
CCDC7-201ENST00000277657 KRT74Q7RTS7 529 aa19.17■□□□□ 0.66
CCDC7-201ENST00000277657 PAQR4Q8N4S7 273 aaPredicted RBP19.17■□□□□ 0.66
CCDC7-201ENST00000277657 FCAMRQ8WWV6 532 aa19.17■□□□□ 0.66
CCDC7-201ENST00000277657 SPACA5Q96QH8 159 aa19.17■□□□□ 0.66
CCDC7-201ENST00000277657 NEURL2Q9BR09 285 aa19.17■□□□□ 0.66
CCDC7-201ENST00000277657 ATG5Q9H1Y0 275 aa19.17■□□□□ 0.66
CCDC7-201ENST00000277657 MMP28Q9H239 520 aa19.17■□□□□ 0.66
CCDC7-201ENST00000277657 CACNG2Q9Y698 323 aa19.17■□□□□ 0.66
CCDC7-201ENST00000277657 A0A0A6YYH2 397 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 hCG_38984A0A1B0GV85 526 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 A6NJ64 397 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 XRCC2O43543 280 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 HCKP08631 526 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 STOMP27105 288 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 GDNFP39905 211 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 RANBP1P43487 201 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 RIPPLY1Q0D2K3 151 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 KLF9Q13886 244 aaPredicted RBP19.16■□□□□ 0.66
CCDC7-201ENST00000277657 C11orf91Q3C1V1 193 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 OR10K2Q6IF99 312 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 CRIP3Q6Q6R5 217 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 ANGPTL5Q86XS5 388 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 ZNF584Q8IVC4 421 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 OR6K3Q8NGY3 331 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 SNRNP27Q8WVK2 155 aaKnown RBP19.16■□□□□ 0.66
CCDC7-201ENST00000277657 PHF21AQ96BD5 680 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 RAB22AQ9UL26 194 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 SLC6A1P30531 599 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 ZNF92Q03936 586 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 UNC119Q13432 240 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 TBRG1Q3YBR2 411 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 ZNF585AQ6P3V2 769 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 Q6ZT83 130 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 NANOS1Q8WY41 292 aaKnown RBP19.16■□□□□ 0.66
CCDC7-201ENST00000277657 AKAP1Q92667 903 aaKnown RBP eCLIP19.16■□□□□ 0.66
CCDC7-201ENST00000277657 POM121L2Q96KW2 1035 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 C1orf147Q96MC9 270 aaPredicted RBP19.16■□□□□ 0.66
CCDC7-201ENST00000277657 TP53TG5Q9Y2B4 290 aa19.16■□□□□ 0.66
CCDC7-201ENST00000277657 FAM240BA0A1B0GVZ2 78 aa19.15■□□□□ 0.66
CCDC7-201ENST00000277657 VSIG8P0DPA2 414 aa19.15■□□□□ 0.66
CCDC7-201ENST00000277657 PTHLHP12272 177 aa19.15■□□□□ 0.66
CCDC7-201ENST00000277657 IGHV1-2P23083 117 aa19.15■□□□□ 0.66
CCDC7-201ENST00000277657 GSK3AP49840 483 aa19.15■□□□□ 0.66
CCDC7-201ENST00000277657 FAM3AP98173 230 aa19.15■□□□□ 0.66
CCDC7-201ENST00000277657 PLP2Q04941 152 aa19.15■□□□□ 0.66
CCDC7-201ENST00000277657 DYRK1AQ13627 763 aa19.15■□□□□ 0.66
CCDC7-201ENST00000277657 SF3B4Q15427 424 aaKnown RBP eCLIP19.15■□□□□ 0.66
CCDC7-201ENST00000277657 OR8B8Q15620 311 aa19.15■□□□□ 0.66
CCDC7-201ENST00000277657 AWAT2Q6E213 333 aa19.15■□□□□ 0.66
CCDC7-201ENST00000277657 MYEF2Q9P2K5 600 aaKnown RBP19.15■□□□□ 0.66
CCDC7-201ENST00000277657 MRPS28Q9Y2Q9 187 aaKnown RBP19.15■□□□□ 0.66
CCDC7-201ENST00000277657 GTF3C1Q12789 2109 aa19.15■□□□□ 0.66
CCDC7-201ENST00000277657 TRAV18A0A075B6X5 111 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 C5orf49A4QMS7 147 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 MBD3L4A6NDZ8 208 aaPredicted RBP19.14■□□□□ 0.65
CCDC7-201ENST00000277657 MBD3L3A6NE82 208 aaPredicted RBP19.14■□□□□ 0.65
CCDC7-201ENST00000277657 MBD3L5A6NJ08 208 aaPredicted RBP19.14■□□□□ 0.65
CCDC7-201ENST00000277657 TMEM14DPA8MWL7 114 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 BTCP35070 178 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 TGFBR3Q03167 851 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 PMPCAQ10713 525 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 KISS1Q15726 138 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 GSG1Q2KHT4 349 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 TMEM42Q69YG0 159 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 CNEP1R1Q8N9A8 125 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 MBD3L2Q8NHZ7 208 aaPredicted RBP19.14■□□□□ 0.65
CCDC7-201ENST00000277657 ZNF75AQ96N20 296 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 C7orf50Q9BRJ6 194 aaKnown RBP19.14■□□□□ 0.65
CCDC7-201ENST00000277657 LUZP4Q9P127 313 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 BSNQ9UPA5 3926 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 MEIOCA2RUB1 952 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 OR3A4PP47883 348 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 KRTCAP3Q53RY4 240 aa19.14■□□□□ 0.65
CCDC7-201ENST00000277657 ZNF324BQ6AW86 544 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms