RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 RHBDD2Q6NTF9 364 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 DGAT2L6Q6ZPD8 337 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 ZNF627Q7L945 461 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 HOGA1Q86XE5 327 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 ANGPTL5Q86XS5 388 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 LYPD6BQ8NI32 183 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 PAQR8Q8TEZ7 354 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 MR1Q95460 341 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 SRA1Q9HD15 236 aaKnown RBP9.17□□□□□ -0.94
UPF3B-201ENST00000276201 VSX1Q9NZR4 365 aaPredicted RBP9.17□□□□□ -0.94
UPF3B-201ENST00000276201 DHCR7Q9UBM7 475 aaKnown RBP9.17□□□□□ -0.94
UPF3B-201ENST00000276201 CSAG2Q9Y5P2 127 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 SEC16AO15027 2179 aa9.17□□□□□ -0.94
UPF3B-201ENST00000276201 FITM1A5D6W6 292 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 GATCO43716 136 aaKnown RBP9.16□□□□□ -0.94
UPF3B-201ENST00000276201 OR10H2O60403 315 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 PLGP00747 810 aaPredicted RBP9.16□□□□□ -0.94
UPF3B-201ENST00000276201 S100A9P06702 114 aaKnown RBP9.16□□□□□ -0.94
UPF3B-201ENST00000276201 PGAM2P15259 253 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 RCC1P18754 421 aaPredicted RBP9.16□□□□□ -0.94
UPF3B-201ENST00000276201 PTGFRP43088 359 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 KCNJ3P48549 501 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 C1orf189Q5VU69 101 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 ARHGEF39Q8N4T4 335 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 COMMD1Q8N668 190 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 BCORP1Q8N888 145 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 OR4N2Q8NGD1 307 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 FAM46BQ96A09 425 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 MALSU1Q96EH3 234 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 SEC22AQ96IW7 307 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 ARL5BQ96KC2 179 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 CMSS1Q9BQ75 279 aaKnown RBP9.16□□□□□ -0.94
UPF3B-201ENST00000276201 OR51M1Q9H341 326 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 TREM1Q9NP99 234 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 SLC22A11Q9NSA0 550 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 GDF2Q9UK05 429 aaPredicted RBP9.16□□□□□ -0.94
UPF3B-201ENST00000276201 SRPK3Q9UPE1 567 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 OR10H1Q9Y4A9 318 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 C1orf196B1AJZ1 125 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 C21orf140B9A014 251 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 RAB27BO00194 218 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 CCSO14618 274 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 FBXO24O75426 580 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 BPNT1O95861 308 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 FABP1P07148 127 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 KLK3P07288 261 aaPredicted RBP9.16□□□□□ -0.94
UPF3B-201ENST00000276201 CT45A8P0DMV1 189 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 CT45A9P0DMV2 189 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 TCN2P20062 427 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 AGAP20933 346 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 S100PP25815 95 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 HSD11B1P28845 292 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 RIDAP52758 137 aaKnown RBP9.16□□□□□ -0.94
UPF3B-201ENST00000276201 BTG2P78543 158 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 EGR4Q05215 589 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 FUT7Q11130 342 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 SKP2Q13309 424 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 MEP1BQ16820 701 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 PRTGQ2VWP7 1150 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 GFOD2Q3B7J2 385 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 GXYLT1Q4G148 440 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 CT45A2Q5DJT8 189 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 GLYATL3Q5SZD4 288 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 CORO6Q6QEF8 472 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 BTNL8Q6UX41 500 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 ZNF561Q8N587 486 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 ARSGQ96EG1 525 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 MOGAT1Q96PD6 335 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 AMELYQ99218 206 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 RHOFQ9HBH0 211 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 PARP11Q9NR21 331 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 KCNG2Q9UJ96 466 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 ZNF346Q9UL40 294 aaKnown RBP9.16□□□□□ -0.94
UPF3B-201ENST00000276201 HHLA2Q9UM44 414 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 B9D1Q9UPM9 204 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 TIMM10BQ9Y5J6 103 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 IGSF10Q6WRI0 2623 aa9.16□□□□□ -0.94
UPF3B-201ENST00000276201 FAM208BQ5VWN6 2430 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 CACNA1GO43497 2377 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 ZNF891A8MT65 544 aaPredicted RBP9.15□□□□□ -0.94
UPF3B-201ENST00000276201 FAM157AC9JC47 383 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 RNASEK-C17orf49H0YIS7 233 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 LINC01387J3KSC0 135 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 BGLAPP02818 100 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 SLC6A8P48029 635 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 SULT1A2P50226 295 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 QRFPP83859 136 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 SRSF3P84103 164 aaKnown RBP9.15□□□□□ -0.94
UPF3B-201ENST00000276201 BIKQ13323 160 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 BEX5Q5H9J7 111 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 VAX1Q5SQQ9 334 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 DEGS2Q6QHC5 323 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 ZNF704Q6ZNC4 412 aaPredicted RBP9.15□□□□□ -0.94
UPF3B-201ENST00000276201 PRSS41Q7RTY9 318 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 FJX1Q86VR8 437 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 LSRQ86X29 649 aaPredicted RBP9.15□□□□□ -0.94
UPF3B-201ENST00000276201 ZSCAN1Q8NBB4 408 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 ZNF519Q8TB69 540 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 DOK4Q8TEW6 326 aa9.15□□□□□ -0.94
UPF3B-201ENST00000276201 DCUN1D4Q92564 292 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms