RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 OPA3Q9H6K4 179 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 TMEM100Q9NV29 134 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 CNOT2Q9NZN8 540 aaKnown RBP10.84□□□□□ -0.67
SS18-202ENST00000269138 CGGBP1Q9UFW8 167 aaPredicted RBP10.84□□□□□ -0.67
SS18-202ENST00000269138 ZDHHC8Q9ULC8 765 aa10.84□□□□□ -0.67
SS18-202ENST00000269138 IGHV3-64DA0A0J9YX35 117 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 A0A1B0GWJ7 208 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 IRGMA1A4Y4 181 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 TRIM64A6NGJ6 449 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 TRIM64BA6NI03 449 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 PTGES3LE9PB15 166 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 F5H5P2 479 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 H3BSH0 61 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 TPD52L2O43399 206 aaKnown RBP10.83□□□□□ -0.68
SS18-202ENST00000269138 CDC14BO60729 498 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 CFL1P23528 166 aaKnown RBP10.83□□□□□ -0.68
SS18-202ENST00000269138 C21orf33P30042 268 aaPredicted RBP10.83□□□□□ -0.68
SS18-202ENST00000269138 ACTA2P62736 377 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 ACTG2P63267 376 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 TNFAIP6P98066 277 aaPredicted RBP10.83□□□□□ -0.68
SS18-202ENST00000269138 OR8B8Q15620 311 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 ZMAT1Q5H9K5 638 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 OR2G6Q5TZ20 316 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 COMMD2Q86X83 199 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 RDH10Q8IZV5 341 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 SYS1Q8N2H4 156 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 ZNF540Q8NDQ6 660 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 OR2G2Q8NGZ5 317 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 MOB1AQ9H8S9 216 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 DECR2Q9NUI1 292 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 PAK1IP1Q9NWT1 392 aaPredicted RBP10.83□□□□□ -0.68
SS18-202ENST00000269138 UBAP1Q9NZ09 502 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 TREM2Q9NZC2 230 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 FRRS1LQ9P0K9 344 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 EXOSC1Q9Y3B2 195 aaKnown RBP10.83□□□□□ -0.68
SS18-202ENST00000269138 RHBDD3Q9Y3P4 386 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 CACNG2Q9Y698 323 aa10.83□□□□□ -0.68
SS18-202ENST00000269138 IGHV4-30-2A0A087WSY4 118 aa10.82□□□□□ -0.68
SS18-202ENST00000269138 CD55P08174 381 aa10.82□□□□□ -0.68
SS18-202ENST00000269138 DDOSTP39656 456 aa10.82□□□□□ -0.68
SS18-202ENST00000269138 FAM209AQ5JX71 171 aa10.82□□□□□ -0.68
SS18-202ENST00000269138 FDX2Q6P4F2 183 aa10.82□□□□□ -0.68
SS18-202ENST00000269138 STX19Q8N4C7 294 aa10.82□□□□□ -0.68
SS18-202ENST00000269138 ITLN1Q8WWA0 313 aa10.82□□□□□ -0.68
SS18-202ENST00000269138 MRPL48Q96GC5 212 aaKnown RBP10.82□□□□□ -0.68
SS18-202ENST00000269138 DIRC2Q96SL1 478 aa10.82□□□□□ -0.68
SS18-202ENST00000269138 SAP30LQ9HAJ7 183 aa10.82□□□□□ -0.68
SS18-202ENST00000269138 MRPL15Q9P015 296 aaKnown RBP10.82□□□□□ -0.68
SS18-202ENST00000269138 ERVK-18Q9QC07 812 aa10.82□□□□□ -0.68
SS18-202ENST00000269138 DENRO43583 198 aaKnown RBP10.81□□□□□ -0.68
SS18-202ENST00000269138 HTR1AP08908 422 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 MYL12AP19105 171 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 PDLIM4P50479 330 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 GTF2A1P52655 376 aaPredicted RBP10.81□□□□□ -0.68
SS18-202ENST00000269138 CSNK2BP67870 215 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 DOC2BQ14184 412 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 OR8G1Q15617 311 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 XAF1Q6GPH4 301 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 CLEC2AQ6UVW9 174 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 SPNS3Q6ZMD2 512 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 ZNF786Q8N393 782 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 KLHL36Q8N4N3 616 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 C10orf105Q8TEF2 133 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 FAM168AQ92567 244 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 RDH5Q92781 318 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 MEGF10Q96KG7 1140 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 OR2V2Q96R30 315 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 EGLN1Q9GZT9 426 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 DCAF16Q9NXF7 216 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 SCN3BQ9NY72 215 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 ZNF391Q9UJN7 358 aa10.81□□□□□ -0.68
SS18-202ENST00000269138 CAB39Q9Y376 341 aaPredicted RBP10.81□□□□□ -0.68
SS18-202ENST00000269138 ITPR3Q14573 2671 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 IGHV1-69-2A0A0G2JMI3 117 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 A6NIN4 97 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 OR4C45A6NMZ5 311 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 ANKRD30BLA7E2S9 258 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 LMX1BO60663 402 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 RP2O75695 350 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 LALBAP00709 142 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 CDK1P06493 297 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 FAHP16930 419 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 TNFSF4P23510 183 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 CRYBB2P43320 205 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 MAP2K3P46734 347 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 GBX2P52951 348 aaPredicted RBP10.8□□□□□ -0.68
SS18-202ENST00000269138 SLC35A2P78381 396 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 MAB21L1Q13394 359 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 ALKBH1Q13686 389 aaKnown RBP10.8□□□□□ -0.68
SS18-202ENST00000269138 DMRTC1Q5HYR2 192 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 TMPRSS11AQ6ZMR5 421 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 KLBQ86Z14 1044 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 CIARTQ8N365 385 aaPredicted RBP10.8□□□□□ -0.68
SS18-202ENST00000269138 PLPP7Q8NBV4 271 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 ZNF485Q8NCK3 441 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 CSNK2A3Q8NEV1 391 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 OR14K1Q8NGZ2 314 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 GATAD2BQ8WXI9 593 aa10.8□□□□□ -0.68
SS18-202ENST00000269138 MYCBPQ99417 103 aaPredicted RBP10.8□□□□□ -0.68
SS18-202ENST00000269138 ADAT1Q9BUB4 502 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms