RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 MGAM2Q2M2H8 2515 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 IGHV3OR16-10A0A075B7F0 116 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 DHRS12A0PJE2 317 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 DNAJC9-AS1A6NH13 148 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 RIIAD1A6NNX1 92 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 C22orf46C9J442 243 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 CLDN34H7C241 214 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 LGALS8O00214 317 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 ACOT8O14734 319 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 RGS13O14921 159 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 IFNGP01579 166 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 RAP2AP10114 183 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 SLC2A1P11166 492 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 CALB2P22676 271 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 DDOSTP39656 456 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 SLC15A1P46059 708 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 MTNR1AP48039 350 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 BAMBIQ13145 260 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 KCNJ8Q15842 424 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 SFRP4Q6FHJ7 346 aaPredicted RBP8.09□□□□□ -1.11
VPS41-201ENST00000265745 PRSS45Q7RTY3 260 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 MRPL41Q8IXM3 137 aaKnown RBP8.09□□□□□ -1.11
VPS41-201ENST00000265745 PARP8Q8N3A8 854 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 OR10G2Q8NGC3 310 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 OR56B2PQ8NGI1 322 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 OR6K6Q8NGW6 343 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 SGMS2Q8NHU3 365 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 SGK3Q96BR1 496 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 ASB9Q96DX5 294 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 FEVQ99581 238 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 NIPSNAP1Q9BPW8 284 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 ADAT1Q9BUB4 502 aaKnown RBP8.09□□□□□ -1.11
VPS41-201ENST00000265745 CHID1Q9BWS9 393 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 OPA3Q9H6K4 179 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 PRPF19Q9UMS4 504 aaKnown RBP8.09□□□□□ -1.11
VPS41-201ENST00000265745 N6AMT1Q9Y5N5 214 aa8.09□□□□□ -1.11
VPS41-201ENST00000265745 ZNF878C9JN71 531 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 XRCC2O43543 280 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 NDUFA2O43678 99 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 FAM107AO95990 144 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 LHBP01229 141 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 GRPP07492 148 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 RNASE1P07998 156 aaKnown RBP8.08□□□□□ -1.12
VPS41-201ENST00000265745 ZNF3P17036 446 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 NPY4RP50391 375 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 GRB2P62993 217 aaKnown RBP8.08□□□□□ -1.12
VPS41-201ENST00000265745 FAM3AP98173 230 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 FOXL1Q12952 345 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 GK3PQ14409 553 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 SLC9A3R2Q15599 337 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 FOXB2Q5VYV0 432 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 CD276Q5ZPR3 534 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 ZNF826PQ6ZT77 177 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 RHOUQ7L0Q8 258 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 SLC16A9Q7RTY1 509 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 DPY19L4Q7Z388 723 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 BOLLQ8N9W6 283 aaKnown RBP8.08□□□□□ -1.12
VPS41-201ENST00000265745 CCDC197Q8NCU1 140 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 GIPC3Q8TF64 312 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 RNF133Q8WVZ7 376 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 SLC25A28Q96A46 364 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 CLPTM1LQ96KA5 538 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 FANCD2OSQ96PS1 177 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 INTS14Q96SY0 518 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 ABHD6Q9BV23 337 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 ZNF747Q9BV97 191 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 C1orf21Q9H246 121 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 TOR3AQ9H497 397 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 PRDM13Q9H4Q3 707 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 MED20Q9H944 212 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 MARCH7Q9H992 704 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 ZMAT3Q9HA38 289 aaKnown RBP8.08□□□□□ -1.12
VPS41-201ENST00000265745 C1orf123Q9NWV4 160 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 TAS2R1Q9NYW7 299 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 ERVK-18Q9QC07 812 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 CTSZQ9UBR2 303 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 PCDHGB1Q9Y5G3 927 aa8.08□□□□□ -1.12
VPS41-201ENST00000265745 DYSFO75923 2080 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 TRAV38-1A0A0B4J264 116 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 TRAV40A0A0B4J280 105 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.07□□□□□ -1.12
VPS41-201ENST00000265745 ARRDC5A6NEK1 342 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 OOEPA6NGQ2 149 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 FAM183AA6NL82 134 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 ANKRD30BLA7E2S9 258 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 SPRY1O43609 319 aaPredicted RBP8.07□□□□□ -1.12
VPS41-201ENST00000265745 ENSAO43768 121 aaKnown RBP8.07□□□□□ -1.12
VPS41-201ENST00000265745 GLCEO94923 617 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 APOC1P02654 83 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 LIPFP07098 398 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 ANXA2P07355 339 aaKnown RBP8.07□□□□□ -1.12
VPS41-201ENST00000265745 GRK5P34947 590 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 OPRL1P41146 370 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 CX3CR1P49238 355 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 BPIFB3P59826 476 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 FGF12P61328 243 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 MZT1Q08AG7 82 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 EIF2B1Q14232 305 aaKnown RBP8.07□□□□□ -1.12
VPS41-201ENST00000265745 OR8B8Q15620 311 aa8.07□□□□□ -1.12
VPS41-201ENST00000265745 TMEM179BQ7Z7N9 219 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms