RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 NDFIP1Q9BT67 221 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 RHOFQ9HBH0 211 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 PYCARD-AS1I3L0S3 204 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 SELENBP1Q13228 472 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 SPATA46Q5T0L3 261 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 EDEM2Q9BV94 578 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 TOX4O94842 621 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 SHBQ15464 509 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 FAHD1Q6P587 224 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 LINC00299Q6ZSB3 139 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 ZNF561Q8N587 486 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 KIAA1958Q8N8K9 716 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 TAAR6Q96RI8 345 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 COMMD5Q9GZQ3 224 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 MBP02144 154 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 PMCHP20382 165 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 ROBO4Q8WZ75 1007 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 PDFQ9HBH1 243 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 EPXP11678 715 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 TMEM267Q0VDI3 215 aaPredicted RBP16.25■□□□□ 0.19
COL5A3-201ENST00000264828 OR52N4Q8NGI2 321 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 ASB16Q96NS5 453 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 TXNIPQ9H3M7 391 aa16.25■□□□□ 0.19
COL5A3-201ENST00000264828 CLEC18AA5D8T8 446 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 TEX261Q6UWH6 196 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 CLEC18CQ8NCF0 446 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 RTN4IP1Q8WWV3 396 aaPredicted RBP16.24■□□□□ 0.19
COL5A3-201ENST00000264828 U3KQ87 197 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 OR2W5A6NFC9 320 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 DHODHQ02127 395 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 IL10RAQ13651 578 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 OR10AD1Q8NGE0 317 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 MYEOVQ96EZ4 313 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 S1PR3Q99500 378 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 ESRP2Q9H6T0 727 aaKnown RBP16.24■□□□□ 0.19
COL5A3-201ENST00000264828 HEXAP06865 529 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 ADGRL4Q9HBW9 690 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 CST7O76096 145 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 PTBP3O95758 552 aaKnown RBP16.24■□□□□ 0.19
COL5A3-201ENST00000264828 RAB5AP20339 215 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 PPICP45877 212 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 GPM6AP51674 278 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 CLDN15P56746 228 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 RPS23P62266 143 aaKnown RBP16.24■□□□□ 0.19
COL5A3-201ENST00000264828 OTUD1Q5VV17 481 aaPredicted RBP16.24■□□□□ 0.19
COL5A3-201ENST00000264828 OSR2Q8N2R0 312 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 OR1N1Q8NGS0 311 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 BCL7CQ8WUZ0 217 aaPredicted RBP16.24■□□□□ 0.19
COL5A3-201ENST00000264828 DUS3LQ96G46 650 aaKnown RBP16.24■□□□□ 0.19
COL5A3-201ENST00000264828 A0A1B0GTL3 188 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 AVPR2P30518 371 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 PARD6AQ9NPB6 346 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 PROCRQ9UNN8 238 aa16.24■□□□□ 0.19
COL5A3-201ENST00000264828 CTSLP07711 333 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 FABP4P15090 132 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 ERVFC1-1P60608 527 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 ACVR1Q04771 509 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 NXF2Q9GZY0 626 aaKnown RBP16.23■□□□□ 0.19
COL5A3-201ENST00000264828 VAMP5O95183 116 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 FAHP16930 419 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 PDCD1Q15116 288 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 UBE3DQ7Z6J8 389 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 OR2G2Q8NGZ5 317 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 M1APQ8TC57 530 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 ACY3Q96HD9 319 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 LRFN3Q9BTN0 628 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 FBXO34Q9NWN3 711 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 PTHLHP12272 177 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 FKBP2P26885 142 aaKnown RBP16.23■□□□□ 0.19
COL5A3-201ENST00000264828 CSF2RBP32927 897 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 RPL13AP40429 203 aaKnown RBP16.23■□□□□ 0.19
COL5A3-201ENST00000264828 GTF2H5Q6ZYL4 71 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 A4GNTQ9UNA3 340 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 TNFRSF10CO14798 259 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 CPEB3Q8NE35 698 aaKnown RBP16.23■□□□□ 0.19
COL5A3-201ENST00000264828 AKR7LQ8NHP1 331 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 LOC102723971A0A1B0GUV8 181 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 GALNT16Q8N428 558 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 PLPPR2Q96GM1 343 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 MED18Q9BUE0 208 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 UCK1Q9HA47 277 aa16.23■□□□□ 0.19
COL5A3-201ENST00000264828 PAPPAQ13219 1627 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 DSCR3O14972 297 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 PNPP00491 289 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 PPP2CBP62714 309 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 PPP2CAP67775 309 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 SLC16A12Q6ZSM3 486 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 SLC38A6Q8IZM9 456 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 TMEM230Q96A57 120 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 MAP6Q96JE9 813 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 FGF20Q9NP95 211 aaPredicted RBP16.22■□□□□ 0.19
COL5A3-201ENST00000264828 S100A8P05109 93 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 TPPP2P59282 170 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 KIRREL2Q6UWL6 708 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 SHISA8B8ZZ34 492 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 LSRQ86X29 649 aaPredicted RBP16.22■□□□□ 0.19
COL5A3-201ENST00000264828 MORN4Q8NDC4 146 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 MENTQ9BUN1 341 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 GPR31O00270 319 aa16.22■□□□□ 0.19
COL5A3-201ENST00000264828 USF1P22415 310 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms