RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 IGKV3D-11A0A0A0MRZ8 115 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 RHPN2P1A8MT19 583 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 WRBO00258 174 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 EFSO43281 561 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 FBLP22087 321 aaKnown RBP8.92□□□□□ -0.98
LIG3-201ENST00000262327 AKIRIN2Q53H80 203 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 FAM69BQ5VUD6 431 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 MYO7BQ6PIF6 2116 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 PUSL1Q8N0Z8 303 aaKnown RBP8.92□□□□□ -0.98
LIG3-201ENST00000262327 DTWD2Q8NBA8 298 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 SLAMF6Q96DU3 332 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 PRRT1Q99946 306 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 DNTTIP1Q9H147 329 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 FER1L5A0AVI2 2057 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 MSGN1A6NI15 193 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 PIAS2O75928 621 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 OR2F2O95006 317 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 ACTL6AO96019 429 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 ADCYAP1P18509 176 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 GPX4P36969 197 aaPredicted RBP8.91□□□□□ -0.98
LIG3-201ENST00000262327 DHPSP49366 369 aaPredicted RBP8.91□□□□□ -0.98
LIG3-201ENST00000262327 EMP2P54851 167 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 OR2F1Q13607 317 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 OR10H5Q8NGA6 315 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 OR4K15Q8NH41 348 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 ASB10Q8WXI3 467 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 GTF3AQ92664 365 aaKnown RBP8.91□□□□□ -0.98
LIG3-201ENST00000262327 FOXRED1Q96CU9 486 aaPredicted RBP8.91□□□□□ -0.98
LIG3-201ENST00000262327 TMEM68Q96MH6 324 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 FAM117AQ9C073 453 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 PBOV1Q9GZY1 135 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 CHMP1AQ9HD42 196 aaPredicted RBP8.91□□□□□ -0.98
LIG3-201ENST00000262327 RHBDD3Q9Y3P4 386 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 CEP192Q8TEP8 1941 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 A0A0A6YYD4 124 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 BLACEA4D250 179 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 MEGF11A6BM72 1044 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 LILRA5A6NI73 299 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 FTCDNL1E5RQL4 147 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 CD63P08962 238 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 SPP1P10451 314 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 CBR1P16152 277 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 FSTP19883 344 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 KLK2P20151 261 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 OR3A4PP47883 348 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 HSF1Q00613 529 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 CFHR1Q03591 330 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 SSBP1Q04837 148 aaKnown RBP8.91□□□□□ -0.98
LIG3-201ENST00000262327 ANKRD39Q53RE8 183 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 GLIPR1L1Q6UWM5 242 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 NUP54Q7Z3B4 507 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 TMEM17Q86X19 198 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 GTPBP8Q8N3Z3 284 aaPredicted RBP8.91□□□□□ -0.98
LIG3-201ENST00000262327 EIF4E3Q8N5X7 224 aaKnown RBP8.91□□□□□ -0.98
LIG3-201ENST00000262327 OR10S1Q8NGN2 331 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 MITD1Q8WV92 249 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 DAZLQ92904 295 aaKnown RBP8.91□□□□□ -0.98
LIG3-201ENST00000262327 ZDHHC12Q96GR4 267 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 GSKIPQ9P0R6 139 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 RAB22AQ9UL26 194 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 FAM96BQ9Y3D0 163 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 TMEM131Q92545 1883 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 A0A1B0GWJ7 208 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 A0A1W2PNR3 127 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 C5orf63A6NC05 138 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 HSPB2A8KAH6 182 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 H0YIZ8 118 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 AGPAT2O15120 278 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 CLN5O75503 358 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 MELTFP08582 738 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 PRF1P14222 555 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 ZNF93P35789 620 aaPredicted RBP8.91□□□□□ -0.98
LIG3-201ENST00000262327 FOXF1Q12946 379 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 HSPB2Q16082 182 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 MICBQ29980 383 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 C1orf100Q5SVJ3 147 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 TMEM244Q5VVB8 128 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 PEAR1Q5VY43 1037 aaPredicted RBP8.91□□□□□ -0.98
LIG3-201ENST00000262327 KLHL24Q6TFL4 600 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 GALNTL5Q7Z4T8 443 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 ABHD12BQ7Z5M8 362 aaPredicted RBP8.91□□□□□ -0.98
LIG3-201ENST00000262327 TMEM105Q8N8V8 129 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 OR5AP2Q8NGF4 316 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 OR1N1Q8NGS0 311 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 OR10R2Q8NGX6 335 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 ST6GALNAC5Q9BVH7 336 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 ZNF319Q9P2F9 582 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 PILRBQ9UKJ0 227 aa8.91□□□□□ -0.98
LIG3-201ENST00000262327 RAD51DO75771 328 aa8.9□□□□□ -0.98
LIG3-201ENST00000262327 CFPP27918 469 aa8.9□□□□□ -0.98
LIG3-201ENST00000262327 MEF2DQ14814 521 aa8.9□□□□□ -0.98
LIG3-201ENST00000262327 PLAC9Q5JTB6 97 aa8.9□□□□□ -0.98
LIG3-201ENST00000262327 C9orf152Q5JTZ5 239 aa8.9□□□□□ -0.98
LIG3-201ENST00000262327 RABEPKQ7Z6M1 372 aa8.9□□□□□ -0.98
LIG3-201ENST00000262327 LDLRAD3Q86YD5 345 aa8.9□□□□□ -0.98
LIG3-201ENST00000262327 OR4K17Q8NGC6 315 aa8.9□□□□□ -0.98
LIG3-201ENST00000262327 THRSPQ92748 146 aa8.9□□□□□ -0.98
LIG3-201ENST00000262327 SLCO5A1Q9H2Y9 848 aa8.9□□□□□ -0.98
LIG3-201ENST00000262327 TREM1Q9NP99 234 aa8.9□□□□□ -0.98
LIG3-201ENST00000262327 FAM206AQ9NX38 181 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms