RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 PRDX4Q13162 271 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 ETFRF1Q6IPR1 90 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 TUSC5Q8IXB3 177 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 PHC2Q8IXK0 858 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 LINC01555Q8NAE3 123 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 OR10V1Q8NGI7 309 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 TXNL4BQ9NX01 149 aaKnown RBP12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 THYN1Q9P016 225 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 XKRY2A2RUG3 117 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 COX7A2P2O60397 106 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 RBP4P02753 201 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 MUC20Q8N307 709 aaPredicted RBP12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 DYNLRB2Q8TF09 96 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 GIMAP1Q8WWP7 306 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 PP6455Q8WZ26 134 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 ZNF75AQ96N20 296 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 NUDT16L1Q9BRJ7 211 aaKnown RBP12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 MMP28Q9H239 520 aa12.16□□□□□ -0.46
PDGFRB-201ENST00000261799 SMIM17P0DL12 118 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 PCBP3P57721 371 aaKnown RBP12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 ZNF658BQ4V348 819 aaPredicted RBP12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 MCHR2Q969V1 340 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 ARHGDIGQ99819 225 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 FAM212BQ9NTI7 297 aaPredicted RBP12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 C1RLQ9NZP8 487 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 MRPS18BQ9Y676 258 aaKnown RBP12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 AGPAT2O15120 278 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 ELK1P19419 428 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 PSMB3P49720 205 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 TLE1Q04724 770 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 GGTLC2Q14390 218 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 CTU2Q2VPK5 515 aaKnown RBP12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 TMPRSS11FQ6ZWK6 438 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 PAQR8Q8TEZ7 354 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 DVL3Q92997 716 aaPredicted RBP12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 SIGLEC11Q96RL6 698 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 TMEM208Q9BTX3 173 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 IKZF5Q9H5V7 419 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 TAS2R5Q9NYW4 299 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 GNG13Q9P2W3 67 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 HOXA4Q00056 320 aaPredicted RBP12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 CLINT1Q14677 625 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 IAH1Q2TAA2 248 aaPredicted RBP12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 DBX2Q6ZNG2 339 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 BPIFCQ8NFQ6 507 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 DDOQ99489 341 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 DOK1Q99704 481 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 ARPC5LQ9BPX5 153 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 C12orf10Q9HB07 376 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 SLC25A19Q9HC21 320 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 TRBV23-1A0A0A0MS06 115 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 A0A0D9SG52 128 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 ZNF17P17021 662 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 ELP2Q6IA86 826 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 ZNF774Q6NX45 483 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 RFPL4BQ6ZWI9 263 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 SPSB1Q96BD6 273 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 GPR78Q96P69 363 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 OR2M2Q96R28 347 aa12.15□□□□□ -0.46
PDGFRB-201ENST00000261799 MCCD1P59942 119 aaPredicted RBP12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 SMN1Q16637 294 aaKnown RBP12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 PTP4A1Q93096 173 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 PDCD1LG2Q9BQ51 273 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 CDK5RAP2Q96SN8 1893 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 KIAA1551Q9HCM1 1747 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 METTL15P1P0C7V9 234 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 ZNF32P17041 273 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 NKX2-1P43699 371 aaPredicted RBP12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 KCNJ3P48549 501 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 SORDQ00796 357 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 ZNF788Q6ZQV5 615 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 SYS1Q8N2H4 156 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 ADPRHL1Q8NDY3 354 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 SMAP2Q8WU79 429 aaPredicted RBP12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 RNF7Q9UBF6 113 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 C19orf57Q0VDD7 668 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 A0A1W2PQD3 144 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 M0R1X1 148 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 NGFP01138 241 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 FAHP16930 419 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 ADRA2CP18825 462 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 MPGP29372 298 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 TMEM267Q0VDI3 215 aaPredicted RBP12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 PRSS41Q7RTY9 318 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 TEX37Q96LM6 180 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 PSD2Q9BQI7 771 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 SOX7Q9BT81 388 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 PURGQ9UJV8 347 aaKnown RBP12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 ZNF225Q9UK10 706 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 COL24A1Q17RW2 1714 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 PLXNB2O15031 1838 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 HRASP01112 189 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 DLEU7Q6UYE1 221 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 OR5R1Q8NH85 324 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 POFUT1Q9H488 388 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 ZMAT3Q9HA38 289 aaKnown RBP12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 OR6C3Q9NZP0 311 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 FLVCR1Q9Y5Y0 555 aa12.14□□□□□ -0.47
PDGFRB-201ENST00000261799 C3orf80F5H4A9 247 aa12.13□□□□□ -0.47
PDGFRB-201ENST00000261799 SSX4O60224 188 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms