RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 CRYM-AS1A6NIL9 109 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 GFYI3L273 518 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 CCSO14618 274 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 ALOX12BO75342 701 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 AKR7A3O95154 331 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 SULT1A3P0DMM9 295 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 SULT1A4P0DMN0 295 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 NDUFB7P17568 137 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 CXCL12P48061 93 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 EDDM3AQ14507 147 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 TMEM128Q5BJH2 165 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 TMEM207Q6UWW9 146 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.36□□□□□ -1.71
RC3H1-201ENST00000258349 TAS1R1Q7RTX1 841 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 ZNF296Q8WUU4 475 aaPredicted RBP4.36□□□□□ -1.71
RC3H1-201ENST00000258349 LHX4Q969G2 390 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 SLC35B3Q9H1N7 401 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 UCK1Q9HA47 277 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 MANBALQ9NQG1 85 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 CCL26Q9Y258 94 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 ACACAQ13085 2346 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 SPTAN1Q13813 2472 aaKnown RBP4.36□□□□□ -1.71
RC3H1-201ENST00000258349 RNASEK-C17orf49H0YIS7 233 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 GALR2O43603 387 aaPredicted RBP4.36□□□□□ -1.71
RC3H1-201ENST00000258349 FCER1GP30273 86 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 MDH2P40926 338 aaKnown RBP4.36□□□□□ -1.71
RC3H1-201ENST00000258349 CNN1P51911 297 aaKnown RBP4.36□□□□□ -1.71
RC3H1-201ENST00000258349 CDK5R1Q15078 307 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 FAM26DQ5JW98 314 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 PRAMEF20Q5VT98 475 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 ADAM5Q6NVV9 412 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 SLC16A11Q8NCK7 471 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 FAM71CQ8NEG0 241 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 OR51H1Q8NH63 302 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 GPR119Q8TDV5 335 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 RHBDD1Q8TEB9 315 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 H1FXQ92522 213 aaKnown RBP4.36□□□□□ -1.71
RC3H1-201ENST00000258349 TRIB1Q96RU8 372 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 KCND3Q9UK17 655 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 SLCO1B1Q9Y6L6 691 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 A0A0B4J203 849 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 TNFRSF10CO14798 259 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 ARPC3O15145 178 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 KLK8O60259 260 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 CIDEAO60543 219 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 GRPP07492 148 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 POLR2IP36954 125 aaKnown RBP4.36□□□□□ -1.71
RC3H1-201ENST00000258349 GNG4P50150 75 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 SLC25A1P53007 311 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 PTTG1IPP53801 180 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 EDDM3BP56851 147 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 RPL18Q07020 188 aaKnown RBP4.36□□□□□ -1.71
RC3H1-201ENST00000258349 CLLU1Q5K131 121 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 OR10P1Q8NGE3 313 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 FBXW5Q969U6 566 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 GALMQ96C23 342 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 WDR61Q9GZS3 305 aaKnown RBP4.36□□□□□ -1.71
RC3H1-201ENST00000258349 ZNF391Q9UJN7 358 aa4.36□□□□□ -1.71
RC3H1-201ENST00000258349 CLEC18AA5D8T8 446 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 M0R082 166 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 M0R135 149 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 CA3P07451 260 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 HIST1H3AP68431 136 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 ACVR1Q04771 509 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 SPANXN5Q5MJ07 72 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 CLEC18CQ8NCF0 446 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 EDARADDQ8WWZ3 215 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 C11orf40Q8WZ69 217 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 RPUSD4Q96CM3 377 aaKnown RBP4.35□□□□□ -1.71
RC3H1-201ENST00000258349 NEIL1Q96FI4 390 aaPredicted RBP4.35□□□□□ -1.71
RC3H1-201ENST00000258349 ZNF799Q96GE5 643 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 TAAR9Q96RI9 348 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 RHOFQ9HBH0 211 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 MRPL22Q9NWU5 206 aaKnown RBP4.35□□□□□ -1.71
RC3H1-201ENST00000258349 OBP2AQ9NY56 170 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 FREM1Q5H8C1 2179 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 FRG2CA6NGY1 282 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 PRKRAO75569 313 aaKnown RBP4.35□□□□□ -1.71
RC3H1-201ENST00000258349 CD37P11049 281 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 EDN3P14138 238 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 SLC19A1P41440 591 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 GPM6AP51674 278 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 RAG2P55895 527 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 OR2W3Q7Z3T1 314 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 PTDSS2Q9BVG9 487 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 FKBP11Q9NYL4 201 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 TEX50A0A1B0GTY4 177 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 AKR1C3P42330 323 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 PCBP4P57723 403 aaKnown RBP4.35□□□□□ -1.71
RC3H1-201ENST00000258349 ZNF121P58317 390 aaPredicted RBP4.35□□□□□ -1.71
RC3H1-201ENST00000258349 KRTDAPP60985 99 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 SELENBP1Q13228 472 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 ZNF718Q3SXZ3 478 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 MIDNQ504T8 468 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 TMEM268Q5VZI3 342 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 ETFRF1Q6IPR1 90 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 C11orf87Q6NUJ2 197 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 ZNF429Q86V71 674 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 ARIH2OSQ8N7S6 290 aa4.35□□□□□ -1.71
RC3H1-201ENST00000258349 OR4S1Q8NGB4 309 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms