RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ARPC4-TTLL3A0A0A6YYG9 625 aa22.54■■□□□ 1.2
RAB40C-201ENST00000248139 ZNF385CQ66K41 422 aaPredicted RBP22.54■■□□□ 1.2
RAB40C-201ENST00000248139 SPEM1Q8N4L4 309 aa22.54■■□□□ 1.2
RAB40C-201ENST00000248139 SNAPC5O75971 98 aa22.54■■□□□ 1.2
RAB40C-201ENST00000248139 HTR3BO95264 441 aa22.54■■□□□ 1.2
RAB40C-201ENST00000248139 SERPINF1P36955 418 aa22.54■■□□□ 1.2
RAB40C-201ENST00000248139 FGL1Q08830 312 aa22.54■■□□□ 1.2
RAB40C-201ENST00000248139 RNF138Q8WVD3 245 aa22.54■■□□□ 1.2
RAB40C-201ENST00000248139 ST6GALNAC5Q9BVH7 336 aa22.54■■□□□ 1.2
RAB40C-201ENST00000248139 RASL12Q9NYN1 266 aa22.54■■□□□ 1.2
RAB40C-201ENST00000248139 ZNF107Q9UII5 783 aaPredicted RBP22.54■■□□□ 1.2
RAB40C-201ENST00000248139 ADAMTS9Q9P2N4 1935 aa22.53■■□□□ 1.2
RAB40C-201ENST00000248139 A0A0D9SG52 128 aa22.53■■□□□ 1.2
RAB40C-201ENST00000248139 ETV2O00321 342 aaPredicted RBP22.53■■□□□ 1.2
RAB40C-201ENST00000248139 ADAP1O75689 374 aa22.53■■□□□ 1.2
RAB40C-201ENST00000248139 SPACA9Q96E40 222 aaPredicted RBP22.53■■□□□ 1.2
RAB40C-201ENST00000248139 IL2RAP01589 272 aa22.53■■□□□ 1.2
RAB40C-201ENST00000248139 SLC6A9P48067 706 aa22.53■■□□□ 1.2
RAB40C-201ENST00000248139 TAGLNQ01995 201 aaKnown RBP22.53■■□□□ 1.2
RAB40C-201ENST00000248139 OR2W3Q7Z3T1 314 aa22.53■■□□□ 1.2
RAB40C-201ENST00000248139 JSRP1Q96MG2 331 aaPredicted RBP22.53■■□□□ 1.2
RAB40C-201ENST00000248139 TMEM59Q9BXS4 323 aa22.53■■□□□ 1.2
RAB40C-201ENST00000248139 OR5H15A6NDH6 313 aa22.52■■□□□ 1.2
RAB40C-201ENST00000248139 KRBOX1C9JBD0 128 aa22.52■■□□□ 1.2
RAB40C-201ENST00000248139 F5H0A9 414 aaPredicted RBP22.52■■□□□ 1.2
RAB40C-201ENST00000248139 CDK2AP1O14519 115 aa22.52■■□□□ 1.2
RAB40C-201ENST00000248139 WDPCPO95876 746 aa22.52■■□□□ 1.2
RAB40C-201ENST00000248139 UBBP0CG47 229 aa22.52■■□□□ 1.2
RAB40C-201ENST00000248139 RPS27AP62979 156 aaKnown RBP22.52■■□□□ 1.2
RAB40C-201ENST00000248139 UBA52P62987 128 aaKnown RBP22.52■■□□□ 1.2
RAB40C-201ENST00000248139 SLC25A53Q5H9E4 307 aa22.52■■□□□ 1.2
RAB40C-201ENST00000248139 UCN2Q96RP3 112 aa22.52■■□□□ 1.2
RAB40C-201ENST00000248139 FANCFQ9NPI8 374 aa22.52■■□□□ 1.2
RAB40C-201ENST00000248139 K7ESF4 209 aa22.52■■□□□ 1.2
RAB40C-201ENST00000248139 BCL2L11O43521 198 aa22.52■■□□□ 1.2
RAB40C-201ENST00000248139 AKR1C2P52895 323 aa22.52■■□□□ 1.2
RAB40C-201ENST00000248139 AKR1C1Q04828 323 aa22.52■■□□□ 1.2
RAB40C-201ENST00000248139 PPP1R3BQ86XI6 285 aa22.52■■□□□ 1.2
RAB40C-201ENST00000248139 ZDHHC22Q8N966 263 aa22.52■■□□□ 1.2
RAB40C-201ENST00000248139 TAS2R3Q9NYW6 316 aa22.52■■□□□ 1.2
RAB40C-201ENST00000248139 MSX1P28360 303 aa22.51■■□□□ 1.19
RAB40C-201ENST00000248139 ACOT7LQ6ZUV0 252 aa22.51■■□□□ 1.19
RAB40C-201ENST00000248139 OR6X1Q8NH79 312 aa22.51■■□□□ 1.19
RAB40C-201ENST00000248139 THAP6Q8TBB0 222 aa22.51■■□□□ 1.19
RAB40C-201ENST00000248139 NARS2Q96I59 477 aaKnown RBP22.51■■□□□ 1.19
RAB40C-201ENST00000248139 LYZL4Q96KX0 146 aa22.51■■□□□ 1.19
RAB40C-201ENST00000248139 OXGR1Q96P68 337 aa22.51■■□□□ 1.19
RAB40C-201ENST00000248139 ZNF385AQ96PM9 386 aaKnown RBP22.51■■□□□ 1.19
RAB40C-201ENST00000248139 DBHP09172 617 aa22.51■■□□□ 1.19
RAB40C-201ENST00000248139 PGAM2P15259 253 aa22.51■■□□□ 1.19
RAB40C-201ENST00000248139 HIST1H1DP16402 221 aaKnown RBP22.51■■□□□ 1.19
RAB40C-201ENST00000248139 CXCL12P48061 93 aa22.51■■□□□ 1.19
RAB40C-201ENST00000248139 ARFRP1Q13795 201 aa22.51■■□□□ 1.19
RAB40C-201ENST00000248139 HSD17B13Q7Z5P4 300 aaPredicted RBP22.51■■□□□ 1.19
RAB40C-201ENST00000248139 SLC39A7Q92504 469 aa22.51■■□□□ 1.19
RAB40C-201ENST00000248139 C5orf66Q9H5L9 145 aa22.51■■□□□ 1.19
RAB40C-201ENST00000248139 CSAG2Q9Y5P2 127 aa22.51■■□□□ 1.19
RAB40C-201ENST00000248139 CHCHD2Q9Y6H1 151 aaPredicted RBP22.51■■□□□ 1.19
RAB40C-201ENST00000248139 SLC22A8Q8TCC7 542 aa22.5■■□□□ 1.19
RAB40C-201ENST00000248139 FBXW5Q969U6 566 aa22.5■■□□□ 1.19
RAB40C-201ENST00000248139 BARX1Q9HBU1 254 aaPredicted RBP22.5■■□□□ 1.19
RAB40C-201ENST00000248139 SLC25A4P12235 298 aa22.5■■□□□ 1.19
RAB40C-201ENST00000248139 STARD6P59095 220 aa22.5■■□□□ 1.19
RAB40C-201ENST00000248139 HOGA1Q86XE5 327 aa22.5■■□□□ 1.19
RAB40C-201ENST00000248139 DTWD2Q8NBA8 298 aa22.5■■□□□ 1.19
RAB40C-201ENST00000248139 TMEM230Q96A57 120 aa22.5■■□□□ 1.19
RAB40C-201ENST00000248139 OR2F2O95006 317 aa22.49■■□□□ 1.19
RAB40C-201ENST00000248139 FAHP16930 419 aa22.49■■□□□ 1.19
RAB40C-201ENST00000248139 EPHA8P29322 1005 aaPredicted RBP22.49■■□□□ 1.19
RAB40C-201ENST00000248139 SRSF4Q08170 494 aaKnown RBP22.49■■□□□ 1.19
RAB40C-201ENST00000248139 OR2F1Q13607 317 aa22.49■■□□□ 1.19
RAB40C-201ENST00000248139 LPCAT3Q6P1A2 487 aa22.49■■□□□ 1.19
RAB40C-201ENST00000248139 TERB2Q8NHR7 220 aa22.49■■□□□ 1.19
RAB40C-201ENST00000248139 ZNF837Q96EG3 531 aaPredicted RBP22.49■■□□□ 1.19
RAB40C-201ENST00000248139 PGAM5Q96HS1 289 aa22.49■■□□□ 1.19
RAB40C-201ENST00000248139 SLC25A32Q9H2D1 315 aa22.49■■□□□ 1.19
RAB40C-201ENST00000248139 ELL3Q9HB65 397 aaPredicted RBP22.49■■□□□ 1.19
RAB40C-201ENST00000248139 DEFA5Q01523 94 aa22.49■■□□□ 1.19
RAB40C-201ENST00000248139 TMEM185AQ8NFB2 350 aa22.49■■□□□ 1.19
RAB40C-201ENST00000248139 OR51T1Q8NGJ9 327 aa22.49■■□□□ 1.19
RAB40C-201ENST00000248139 CHMP1AQ9HD42 196 aaPredicted RBP22.49■■□□□ 1.19
RAB40C-201ENST00000248139 STMND1H3BQB6 276 aa22.48■■□□□ 1.19
RAB40C-201ENST00000248139 TRIM77I1YAP6 450 aa22.48■■□□□ 1.19
RAB40C-201ENST00000248139 DUS4LO95620 317 aaKnown RBP22.48■■□□□ 1.19
RAB40C-201ENST00000248139 SERPINA2P20848 420 aa22.48■■□□□ 1.19
RAB40C-201ENST00000248139 INO80EQ8NBZ0 244 aaPredicted RBP22.48■■□□□ 1.19
RAB40C-201ENST00000248139 KCNG3Q8TAE7 436 aa22.48■■□□□ 1.19
RAB40C-201ENST00000248139 ASB13Q8WXK3 278 aa22.48■■□□□ 1.19
RAB40C-201ENST00000248139 DCUN1D4Q92564 292 aa22.48■■□□□ 1.19
RAB40C-201ENST00000248139 RRNAD1Q96FB5 475 aaKnown RBP22.48■■□□□ 1.19
RAB40C-201ENST00000248139 OR14K1Q8NGZ2 314 aa22.48■■□□□ 1.19
RAB40C-201ENST00000248139 PIGTQ969N2 578 aa22.48■■□□□ 1.19
RAB40C-201ENST00000248139 GAREM1Q9H706 876 aa22.48■■□□□ 1.19
RAB40C-201ENST00000248139 C12orf4Q9NQ89 552 aa22.48■■□□□ 1.19
RAB40C-201ENST00000248139 B3GALT1Q9Y5Z6 326 aa22.48■■□□□ 1.19
RAB40C-201ENST00000248139 AQP7P3A6NL99 342 aa22.47■■□□□ 1.19
RAB40C-201ENST00000248139 H0YIZ8 118 aa22.47■■□□□ 1.19
RAB40C-201ENST00000248139 DKK1O94907 266 aa22.47■■□□□ 1.19
RAB40C-201ENST00000248139 CCL3P10147 92 aa22.47■■□□□ 1.19
RAB40C-201ENST00000248139 CRIP3Q6Q6R5 217 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms