RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 PRAF2O60831 178 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 TGM6O95932 706 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 FAHP16930 419 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 CXCL3P19876 107 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 MECP2P51608 486 aaKnown RBP16.16■□□□□ 0.18
HOXC11-201ENST00000243082 SLC10A1Q14973 349 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 UBE2V2Q15819 145 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 DMRTC1Q5HYR2 192 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 FGD2Q7Z6J4 655 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 PRSS33Q8NF86 280 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 TRAF4Q9BUZ4 470 aaPredicted RBP16.16■□□□□ 0.18
HOXC11-201ENST00000243082 OR2H1Q9GZK4 316 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 SLC7A10Q9NS82 523 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 EMC3Q9P0I2 261 aa16.16■□□□□ 0.18
HOXC11-201ENST00000243082 MCTS1Q9ULC4 181 aaKnown RBP16.16■□□□□ 0.18
HOXC11-201ENST00000243082 ZNF407Q9C0G0 2248 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 A0A1B0GUH1 482 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 TNFRSF10AO00220 468 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 LIPCP11150 499 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
HOXC11-201ENST00000243082 RAD52P43351 418 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 ARG2P78540 354 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 FAPQ12884 760 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 ZNF766Q5HY98 468 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 STEAP1BQ6NZ63 245 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 ZNF782Q6ZMW2 699 aaPredicted RBP16.15■□□□□ 0.18
HOXC11-201ENST00000243082 OR2W3Q7Z3T1 314 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 ZNF101Q8IZC7 436 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 GABRG1Q8N1C3 465 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 TMEM229BQ8NBD8 167 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 TMEM104Q8NE00 496 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 CCDC54Q8NEL0 328 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 OR8S1Q8NH09 359 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 PARPBPQ9NWS1 579 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 PIGLQ9Y2B2 252 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 DMXL1Q9Y485 3027 aa16.15■□□□□ 0.18
HOXC11-201ENST00000243082 ATP6V1G1O75348 118 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 MTRF1O75570 445 aaKnown RBP16.14■□□□□ 0.17
HOXC11-201ENST00000243082 ALX3O95076 343 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 MMP7P09237 267 aaPredicted RBP16.14■□□□□ 0.17
HOXC11-201ENST00000243082 SULT1A3P0DMM9 295 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 SULT1A4P0DMN0 295 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 ERP29P30040 261 aaKnown RBP16.14■□□□□ 0.17
HOXC11-201ENST00000243082 PCBD1P61457 104 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 SF3B4Q15427 424 aaKnown RBP eCLIP16.14■□□□□ 0.17
HOXC11-201ENST00000243082 C3AR1Q16581 482 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 CDNFQ49AH0 187 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 RNFT1Q5M7Z0 435 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 Q6ZTK2 550 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 FAM109AQ8N4B1 249 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 PP6455Q8WZ26 134 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 DACT3Q96B18 629 aaPredicted RBP16.14■□□□□ 0.17
HOXC11-201ENST00000243082 C10orf35Q96D05 121 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 CHST5Q9GZS9 411 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 LPAR5Q9H1C0 372 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 CALHM2Q9HA72 323 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 BCO1Q9HAY6 547 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 PLSCR3Q9NRY6 295 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 FAM86C1Q9NVL1 165 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 KLK13Q9UKR3 277 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 ACTL6AO96019 429 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 MELTFP08582 738 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 HTR5AP47898 357 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 TAS2R19P59542 299 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 CDK10Q15131 360 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 RBMS2Q15434 407 aaKnown RBP16.14■□□□□ 0.17
HOXC11-201ENST00000243082 KISS1Q15726 138 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 NRN1LQ496H8 165 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 METTL11BQ5VVY1 283 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 GLDNQ6ZMI3 551 aaPredicted RBP16.14■□□□□ 0.17
HOXC11-201ENST00000243082 TMPRSS7Q7RTY8 843 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 OR51S1Q8NGJ8 323 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 NUDT16L1Q9BRJ7 211 aaKnown RBP16.14■□□□□ 0.17
HOXC11-201ENST00000243082 NICN1Q9BSH3 213 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 DEFB127Q9H1M4 99 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 RNF122Q9H9V4 155 aa16.14■□□□□ 0.17
HOXC11-201ENST00000243082 DNAJC13O75165 2243 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 A0A0A6YYD4 124 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 ZNF724A8MTY0 619 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 RPL36A-HNRNPH2H7BZ11 118 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 PYCARD-AS1I3L0S3 204 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 WT1P19544 449 aaPredicted RBP16.13■□□□□ 0.17
HOXC11-201ENST00000243082 ANXA7P20073 488 aaKnown RBP16.13■□□□□ 0.17
HOXC11-201ENST00000243082 GSK3AP49840 483 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 CHST4Q8NCG5 386 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 OR10R2Q8NGX6 335 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 OR2AE1Q8NHA4 323 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 KCNG3Q8TAE7 436 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 GPER1Q99527 375 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 SEC22CQ9BRL7 303 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 PRRG4Q9BZD6 226 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 EXO5Q9H790 373 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 ZNF222Q9UK12 451 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 CSAG2Q9Y5P2 127 aa16.13■□□□□ 0.17
HOXC11-201ENST00000243082 FABP7O15540 132 aa16.12■□□□□ 0.17
HOXC11-201ENST00000243082 SSNA1O43805 119 aa16.12■□□□□ 0.17
HOXC11-201ENST00000243082 CDC14BO60729 498 aa16.12■□□□□ 0.17
HOXC11-201ENST00000243082 SCGNO76038 276 aa16.12■□□□□ 0.17
HOXC11-201ENST00000243082 ACKR3P25106 362 aa16.12■□□□□ 0.17
HOXC11-201ENST00000243082 ARF1P84077 181 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms