RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 TMEM104Q8NE00 496 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 NUDCD2Q8WVJ2 157 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 MRGPRFQ96AM1 343 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 FAHD2AQ96GK7 314 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 LYZL4Q96KX0 146 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 SRXN1Q9BYN0 137 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 KCNK7Q9Y2U2 307 aa14.22□□□□□ -0.13
UBE3D-201ENST00000237186 DHRS3O75911 302 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 IL2RAP01589 272 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 NAT2P11245 290 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 S100A11P31949 105 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 OR3A4PP47883 348 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 ZNF84P51523 738 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 DHRS2Q13268 280 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 SCGB2B2Q4G0G5 96 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 NHLRC3Q5JS37 347 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 B3GNTL1Q67FW5 361 aaPredicted RBP14.21□□□□□ -0.13
UBE3D-201ENST00000237186 C6orf15Q6UXA7 325 aaPredicted RBP14.21□□□□□ -0.13
UBE3D-201ENST00000237186 NAA40Q86UY6 237 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 PP6455Q8WZ26 134 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 NICN1Q9BSH3 213 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 RBM24Q9BX46 236 aaKnown RBP14.21□□□□□ -0.13
UBE3D-201ENST00000237186 SPRY4Q9C004 299 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 ZNF224Q9NZL3 707 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 VSIG4Q9Y279 399 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 LOXL2Q9Y4K0 774 aa14.21□□□□□ -0.13
UBE3D-201ENST00000237186 MASP2O00187 686 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 CD8AP01732 235 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 SERPINA7P05543 415 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 HCKP08631 526 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 HIST1H1DP16402 221 aaKnown RBP14.21□□□□□ -0.14
UBE3D-201ENST00000237186 ZNF24P17028 368 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 TCN2P20062 427 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 ZBTB25P24278 435 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 CALCRP30988 508 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 TMEM50BP56557 158 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 OC90Q02509 493 aaPredicted RBP14.21□□□□□ -0.14
UBE3D-201ENST00000237186 GK2Q14410 553 aaPredicted RBP14.21□□□□□ -0.14
UBE3D-201ENST00000237186 PLAC9Q5JTB6 97 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 CRIP3Q6Q6R5 217 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 C3P1Q6ZMU1 363 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 TIPARPQ7Z3E1 657 aaKnown RBP14.21□□□□□ -0.14
UBE3D-201ENST00000237186 TMED4Q7Z7H5 227 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 CD163Q86VB7 1156 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 OR56B1Q8NGI3 324 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 RAB3CQ96E17 227 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 SPACA5Q96QH8 159 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 TMEM59Q9BXS4 323 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 ULBP2Q9BZM5 246 aa14.21□□□□□ -0.14
UBE3D-201ENST00000237186 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.21□□□□□ -0.14
UBE3D-201ENST00000237186 C5orf63A6NC05 138 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 OR5H15A6NDH6 313 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 RFPL4AA6NLU0 287 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 F5H5K5 113 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 RFPL4AL1F8VTS6 287 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 MPIG6BO95866 241 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 CD96P40200 585 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 MPLP40238 635 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 RAB14P61106 215 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 HLXQ14774 488 aaPredicted RBP14.2□□□□□ -0.14
UBE3D-201ENST00000237186 NKPD1Q17RQ9 610 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 ACER2Q5QJU3 275 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 TCEAL6Q6IPX3 200 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 GGNQ86UU5 652 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 TCEAL3Q969E4 200 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 ADGRG7Q96K78 797 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 URM1Q9BTM9 101 aaKnown RBP14.2□□□□□ -0.14
UBE3D-201ENST00000237186 ARRDC1-AS1Q9H2J1 176 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 IFT46Q9NQC8 304 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 KCNN3Q9UGI6 736 aa14.2□□□□□ -0.14
UBE3D-201ENST00000237186 LRRC3CA6NJW4 275 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 ZNF716A6NP11 495 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 SOCS1O15524 211 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 RPA2P15927 270 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 OTX2P32243 289 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 HRH1P35367 487 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 CARD18P57730 90 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 RPS18P62269 152 aaKnown RBP14.19□□□□□ -0.14
UBE3D-201ENST00000237186 KISS1Q15726 138 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 SLC22A6Q4U2R8 563 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 VAX1Q5SQQ9 334 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 OR52W1Q6IF63 320 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 TMEM65Q6PI78 240 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 C11orf88Q6PI97 169 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 TMUB2Q71RG4 321 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 PNLDC1Q8NA58 520 aaKnown RBP14.19□□□□□ -0.14
UBE3D-201ENST00000237186 OR5M8Q8NGP6 311 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 RHBDD1Q8TEB9 315 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 CT55Q8WUE5 264 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 SPTSSAQ969W0 71 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 OCSTAMPQ9BR26 566 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 CHST5Q9GZS9 411 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 KIF25Q9UIL4 384 aa14.19□□□□□ -0.14
UBE3D-201ENST00000237186 A0A0G2JMM0 328 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 A0A1W2PPB8 328 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 A0A1W2PRS3 328 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 DHRS7CA6NNS2 312 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 CEACAM18A8MTB9 384 aa14.18□□□□□ -0.14
UBE3D-201ENST00000237186 FOXI3A8MTJ6 420 aaPredicted RBP14.18□□□□□ -0.14
UBE3D-201ENST00000237186 KIR3DP1A8MWS1 328 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms