RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 SLC3A1Q07837 685 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 POU4F2Q12837 409 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 TMED1Q13445 227 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 ZNF829Q3KNS6 432 aaPredicted RBP10.69□□□□□ -0.7
LSM5-201ENST00000223084 SLC25A30Q5SVS4 291 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 HPS1Q92902 700 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 TIMD4Q96H15 378 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 SIGLEC11Q96RL6 698 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 MNTQ99583 582 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 PBOV1Q9GZY1 135 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 RGCCQ9H4X1 137 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 UFSP2Q9NUQ7 469 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 MRPL15Q9P015 296 aaKnown RBP10.69□□□□□ -0.7
LSM5-201ENST00000223084 GTF2A1LQ9UNN4 478 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 NPTNQ9Y639 398 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 WNK2Q9Y3S1 2297 aa10.69□□□□□ -0.7
LSM5-201ENST00000223084 ANKRD30BLA7E2S9 258 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 A8MV72 311 aaPredicted RBP10.68□□□□□ -0.7
LSM5-201ENST00000223084 TMEM178BH3BS89 294 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 SLC16A6O15403 523 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 GMDSO60547 372 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 SRSF10O75494 262 aaKnown RBP10.68□□□□□ -0.7
LSM5-201ENST00000223084 RPP14O95059 124 aaKnown RBP10.68□□□□□ -0.7
LSM5-201ENST00000223084 CLIC3O95833 236 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 IGHV2-70P01814 119 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 OR2T7P0C7T2 308 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 CFL1P23528 166 aaKnown RBP10.68□□□□□ -0.7
LSM5-201ENST00000223084 DDOSTP39656 456 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 CD200P41217 278 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 MTNR1AP48039 350 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 HOXA4Q00056 320 aaPredicted RBP10.68□□□□□ -0.7
LSM5-201ENST00000223084 ZNF85Q03923 595 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 EGR3Q06889 387 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 MPPED2Q15777 294 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 FAM201AQ5SY85 155 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 MEDAGQ5VYS4 303 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 PEG10Q86TG7 708 aaKnown RBP10.68□□□□□ -0.7
LSM5-201ENST00000223084 YIPF7Q8N8F6 280 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 ZNF555Q8NEP9 628 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 OR2T27Q8NH04 317 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 RHOXF1Q8NHV9 184 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 GAL3ST1Q99999 423 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 SLC22A4Q9H015 551 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 LPAR2Q9HBW0 351 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 AMBNQ9NP70 447 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 UBAP1Q9NZ09 502 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 NKX1-2Q9UD57 310 aaPredicted RBP10.68□□□□□ -0.7
LSM5-201ENST00000223084 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.68□□□□□ -0.7
LSM5-201ENST00000223084 RHBDD3Q9Y3P4 386 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 R4GMQ9 66 aa10.68□□□□□ -0.7
LSM5-201ENST00000223084 ACOD1A6NK06 481 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 LOC110117498-PIK3R3F6TDL0 507 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 LMX1BO60663 402 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 FAM20BO75063 409 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 TTRP02766 147 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 KRT8P05787 483 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 GRPP07492 148 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 DCTDP32321 178 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 GATA4P43694 442 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 CDH15P55291 814 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 ZMYND11Q15326 602 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 OR8B8Q15620 311 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 TP53I3Q53FA7 332 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 ZNF684Q5T5D7 378 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 OGFRL1Q5TC84 451 aaPredicted RBP10.67□□□□□ -0.7
LSM5-201ENST00000223084 FAM166AQ6J272 317 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 COMMD2Q86X83 199 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 LINC01356Q8N9X3 169 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 OR51E1Q8TCB6 317 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 APH1BQ8WW43 257 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 CYGBQ8WWM9 190 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 LGALS12Q96DT0 336 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 C1orf159Q96HA4 380 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 FAM71F1Q96KD3 344 aaPredicted RBP10.67□□□□□ -0.7
LSM5-201ENST00000223084 RDH12Q96NR8 316 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 PAPOLGQ9BWT3 736 aaKnown RBP10.67□□□□□ -0.7
LSM5-201ENST00000223084 ZNF665Q9H7R5 613 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 G6PC2Q9NQR9 355 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 GPR84Q9NQS5 396 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 NUFIP1Q9UHK0 495 aaKnown RBP10.67□□□□□ -0.7
LSM5-201ENST00000223084 OR52A1Q9UKL2 312 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 SLC22A13Q9Y226 551 aa10.67□□□□□ -0.7
LSM5-201ENST00000223084 NOP16Q9Y3C1 178 aaKnown RBP10.67□□□□□ -0.7
LSM5-201ENST00000223084 A0A0U1RQV5 110 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 METTL15A6NJ78 407 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 ZNF850A8MQ14 1090 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 CASQ2O14958 399 aaPredicted RBP10.66□□□□□ -0.7
LSM5-201ENST00000223084 IGHV2-5P01817 119 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 DBTP11182 482 aaKnown RBP10.66□□□□□ -0.7
LSM5-201ENST00000223084 PSMB10P40306 273 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 BTG1P62324 171 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 IL5RAQ01344 420 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 ZNF91Q05481 1191 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 ODF4Q2M2E3 257 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 BCL2L15Q5TBC7 163 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 LIPNQ5VXI9 398 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 ZNF826PQ6ZT77 177 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 IL17RELQ6ZVW7 336 aa10.66□□□□□ -0.7
LSM5-201ENST00000223084 LRRC28Q86X40 367 aaPredicted RBP10.66□□□□□ -0.7
LSM5-201ENST00000223084 PACRGLQ8N7B6 248 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms