RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 IGHV4-31P0DP07 118 aa22.57■■□□□ 1.2
VEGFA-231ENST00000640499 GPR6P46095 362 aaPredicted RBP22.57■■□□□ 1.2
VEGFA-231ENST00000640499 ZNF684Q5T5D7 378 aa22.57■■□□□ 1.2
VEGFA-231ENST00000640499 KCTD18Q6PI47 426 aaPredicted RBP22.57■■□□□ 1.2
VEGFA-231ENST00000640499 OR8B12Q8NGG6 310 aa22.57■■□□□ 1.2
VEGFA-231ENST00000640499 OR52H1Q8NGJ2 320 aa22.57■■□□□ 1.2
VEGFA-231ENST00000640499 PPP1R14AQ96A00 147 aa22.57■■□□□ 1.2
VEGFA-231ENST00000640499 REEP6Q96HR9 211 aa22.57■■□□□ 1.2
VEGFA-231ENST00000640499 PGAM5Q96HS1 289 aa22.57■■□□□ 1.2
VEGFA-231ENST00000640499 OR2V2Q96R30 315 aa22.57■■□□□ 1.2
VEGFA-231ENST00000640499 MNTQ99583 582 aa22.57■■□□□ 1.2
VEGFA-231ENST00000640499 NIPAL2Q9H841 368 aa22.57■■□□□ 1.2
VEGFA-231ENST00000640499 FN1P02751 2386 aaKnown RBP22.56■■□□□ 1.2
VEGFA-231ENST00000640499 A0A1W2PQL4 384 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-231ENST00000640499 J3QRE1 110 aa22.56■■□□□ 1.2
VEGFA-231ENST00000640499 CASQ2O14958 399 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-231ENST00000640499 PPIHO43447 177 aaKnown RBP22.56■■□□□ 1.2
VEGFA-231ENST00000640499 ZNF254O75437 659 aa22.56■■□□□ 1.2
VEGFA-231ENST00000640499 MAB21L1Q13394 359 aa22.56■■□□□ 1.2
VEGFA-231ENST00000640499 OGFRL1Q5TC84 451 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-231ENST00000640499 OR56B2PQ8NGI1 322 aa22.56■■□□□ 1.2
VEGFA-231ENST00000640499 SPRYD4Q8WW59 207 aaPredicted RBP22.56■■□□□ 1.2
VEGFA-231ENST00000640499 CCL17Q92583 94 aa22.56■■□□□ 1.2
VEGFA-231ENST00000640499 RFKQ969G6 155 aa22.56■■□□□ 1.2
VEGFA-231ENST00000640499 MEGF10Q96KG7 1140 aa22.56■■□□□ 1.2
VEGFA-231ENST00000640499 RDH12Q96NR8 316 aa22.56■■□□□ 1.2
VEGFA-231ENST00000640499 TBX5Q99593 518 aa22.56■■□□□ 1.2
VEGFA-231ENST00000640499 MROQ9BYG7 248 aa22.56■■□□□ 1.2
VEGFA-231ENST00000640499 NF1P21359 2839 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 GGT3PA6NGU5 568 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 ZNF670-ZNF695F2Z2N8 137 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 OR2T7P0C7T2 308 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 CA6P23280 308 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 DCTDP32321 178 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 ZNF85Q03923 595 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 MFGE8Q08431 387 aaPredicted RBP22.55■■□□□ 1.2
VEGFA-231ENST00000640499 TIGD6Q17RP2 521 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 HFEQ30201 348 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 PLEKHG7Q6ZR37 379 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 OR2T27Q8NH04 317 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 APH1BQ8WW43 257 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 OR10A2Q9H208 303 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 PPP1R3EQ9H7J1 279 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 SP140LQ9H930 580 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 ZFHX3Q15911 3703 aa22.55■■□□□ 1.2
VEGFA-231ENST00000640499 IGHV3-64DA0A0J9YX35 117 aa22.54■■□□□ 1.2
VEGFA-231ENST00000640499 TMEM269A0A1B0GVZ9 245 aa22.54■■□□□ 1.2
VEGFA-231ENST00000640499 CD5LO43866 347 aa22.54■■□□□ 1.2
VEGFA-231ENST00000640499 TNFSF4P23510 183 aa22.54■■□□□ 1.2
VEGFA-231ENST00000640499 PMELP40967 661 aa22.54■■□□□ 1.2
VEGFA-231ENST00000640499 EGR3Q06889 387 aa22.54■■□□□ 1.2
VEGFA-231ENST00000640499 POU4F2Q12837 409 aa22.54■■□□□ 1.2
VEGFA-231ENST00000640499 AVPI1Q5T686 147 aa22.54■■□□□ 1.2
VEGFA-231ENST00000640499 MEDAGQ5VYS4 303 aa22.54■■□□□ 1.2
VEGFA-231ENST00000640499 SIGLEC11Q96RL6 698 aa22.54■■□□□ 1.2
VEGFA-231ENST00000640499 OPA3Q9H6K4 179 aa22.54■■□□□ 1.2
VEGFA-231ENST00000640499 GCM1Q9NP62 436 aa22.54■■□□□ 1.2
VEGFA-231ENST00000640499 MRPL15Q9P015 296 aaKnown RBP22.54■■□□□ 1.2
VEGFA-231ENST00000640499 IKZF2Q9UKS7 526 aa22.54■■□□□ 1.2
VEGFA-231ENST00000640499 NIPBLQ6KC79 2804 aaeCLIP22.54■■□□□ 1.22e-6■■□□□ 11.5
VEGFA-231ENST00000640499 CLIC3O95833 236 aa22.53■■□□□ 1.2
VEGFA-231ENST00000640499 MTNR1AP48039 350 aa22.53■■□□□ 1.2
VEGFA-231ENST00000640499 GSK3AP49840 483 aa22.53■■□□□ 1.2
VEGFA-231ENST00000640499 MMP16P51512 607 aa22.53■■□□□ 1.2
VEGFA-231ENST00000640499 PACRGLQ8N7B6 248 aa22.53■■□□□ 1.2
VEGFA-231ENST00000640499 OR10H4Q8NGA5 316 aa22.53■■□□□ 1.2
VEGFA-231ENST00000640499 CLDND2Q8NHS1 167 aa22.53■■□□□ 1.2
VEGFA-231ENST00000640499 DVL3Q92997 716 aaPredicted RBP22.53■■□□□ 1.2
VEGFA-231ENST00000640499 RNF166Q96A37 237 aaPredicted RBP22.53■■□□□ 1.2
VEGFA-231ENST00000640499 RNFT2Q96EX2 444 aa22.53■■□□□ 1.2
VEGFA-231ENST00000640499 TMEM106BQ9NUM4 274 aa22.53■■□□□ 1.2
VEGFA-231ENST00000640499 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.53■■□□□ 1.23e-7■■□□□ 12.6
VEGFA-231ENST00000640499 WIPI2Q9Y4P8 454 aa22.53■■□□□ 1.2
VEGFA-231ENST00000640499 ACOD1A6NK06 481 aa22.52■■□□□ 1.2
VEGFA-231ENST00000640499 PHYHO14832 338 aa22.52■■□□□ 1.2
VEGFA-231ENST00000640499 IGLV3-1P01715 115 aa22.52■■□□□ 1.2
VEGFA-231ENST00000640499 ACKR3P25106 362 aa22.52■■□□□ 1.2
VEGFA-231ENST00000640499 CHN2P52757 468 aa22.52■■□□□ 1.2
VEGFA-231ENST00000640499 RIDAP52758 137 aaKnown RBP22.52■■□□□ 1.2
VEGFA-231ENST00000640499 ADARB1P78563 741 aaKnown RBP22.52■■□□□ 1.2
VEGFA-231ENST00000640499 MVKQ03426 396 aa22.52■■□□□ 1.2
VEGFA-231ENST00000640499 OR8B8Q15620 311 aa22.52■■□□□ 1.2
VEGFA-231ENST00000640499 GFOD2Q3B7J2 385 aa22.52■■□□□ 1.2
VEGFA-231ENST00000640499 PBOV1Q9GZY1 135 aa22.52■■□□□ 1.2
VEGFA-231ENST00000640499 RGCCQ9H4X1 137 aa22.52■■□□□ 1.2
VEGFA-231ENST00000640499 NARFLQ9H6Q4 476 aa22.52■■□□□ 1.2
VEGFA-231ENST00000640499 DCLRE1BQ9H816 532 aa22.52■■□□□ 1.2
VEGFA-231ENST00000640499 G6PC2Q9NQR9 355 aa22.52■■□□□ 1.2
VEGFA-231ENST00000640499 MALRD1Q5VYJ5 2156 aa22.52■■□□□ 1.2
VEGFA-231ENST00000640499 CLDN25C9JDP6 229 aa22.51■■□□□ 1.19
VEGFA-231ENST00000640499 WBP4O75554 376 aaKnown RBP22.51■■□□□ 1.19
VEGFA-231ENST00000640499 TNFRSF1AP19438 455 aa22.51■■□□□ 1.19
VEGFA-231ENST00000640499 CD200P41217 278 aa22.51■■□□□ 1.19
VEGFA-231ENST00000640499 LMO4P61968 165 aa22.51■■□□□ 1.19
VEGFA-231ENST00000640499 ZNF420Q8TAQ5 688 aaPredicted RBP22.51■■□□□ 1.19
VEGFA-231ENST00000640499 MSI2Q96DH6 328 aaKnown RBP22.51■■□□□ 1.19
VEGFA-231ENST00000640499 C1orf159Q96HA4 380 aa22.51■■□□□ 1.19
VEGFA-231ENST00000640499 C8orf4Q9NR00 106 aa22.51■■□□□ 1.19
VEGFA-231ENST00000640499 EXOGQ9Y2C4 368 aaKnown RBP22.51■■□□□ 1.19
VEGFA-231ENST00000640499 LOC100289279A0A1B0GTE1 492 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms