RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 FAM118AQ9NWS6 357 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 WARS2Q9UGM6 360 aaKnown RBP18.41■□□□□ 0.54
SCN1B-206ENST00000638536 IL19Q9UHD0 177 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 GMPPBQ9Y5P6 360 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 GGT3PA6NGU5 568 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 GABRB1P18505 474 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 CA6P23280 308 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 PEX2P28328 305 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 ROM1Q03395 351 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 MAB21L1Q13394 359 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 HFEQ30201 348 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 PLEKHG7Q6ZR37 379 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 ZNF679Q8IYX0 411 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 OR8B12Q8NGG6 310 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 PGAM5Q96HS1 289 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 LYZL4Q96KX0 146 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 CLN6Q9NWW5 311 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 FAM206AQ9NX38 181 aa18.41■□□□□ 0.54
SCN1B-206ENST00000638536 LOC100130705A0A1B0GUX0 176 aa18.4■□□□□ 0.54
SCN1B-206ENST00000638536 INAFM1C9JVW0 142 aa18.4■□□□□ 0.54
SCN1B-206ENST00000638536 XRCC2O43543 280 aa18.4■□□□□ 0.54
SCN1B-206ENST00000638536 CD5LO43866 347 aa18.4■□□□□ 0.54
SCN1B-206ENST00000638536 PNPP00491 289 aa18.4■□□□□ 0.54
SCN1B-206ENST00000638536 PSMA6P60900 246 aaKnown RBP18.4■□□□□ 0.54
SCN1B-206ENST00000638536 SNRPGP62308 76 aaKnown RBP18.4■□□□□ 0.54
SCN1B-206ENST00000638536 TIGD6Q17RP2 521 aa18.4■□□□□ 0.54
SCN1B-206ENST00000638536 KCTD18Q6PI47 426 aaPredicted RBP18.4■□□□□ 0.54
SCN1B-206ENST00000638536 ZNF322Q6U7Q0 402 aaPredicted RBP18.4■□□□□ 0.54
SCN1B-206ENST00000638536 ENTHD1Q8IYW4 607 aa18.4■□□□□ 0.54
SCN1B-206ENST00000638536 CLDND2Q8NHS1 167 aa18.4■□□□□ 0.54
SCN1B-206ENST00000638536 ZNF420Q8TAQ5 688 aaPredicted RBP18.4■□□□□ 0.54
SCN1B-206ENST00000638536 MSI2Q96DH6 328 aaKnown RBP18.4■□□□□ 0.54
SCN1B-206ENST00000638536 MEGF10Q96KG7 1140 aa18.4■□□□□ 0.54
SCN1B-206ENST00000638536 MROQ9BYG7 248 aa18.4■□□□□ 0.54
SCN1B-206ENST00000638536 WIPI2Q9Y4P8 454 aa18.4■□□□□ 0.54
SCN1B-206ENST00000638536 hCG_38984A0A1B0GV85 526 aa18.39■□□□□ 0.53
SCN1B-206ENST00000638536 APOC1P02654 83 aa18.39■□□□□ 0.53
SCN1B-206ENST00000638536 TNFSF4P23510 183 aa18.39■□□□□ 0.53
SCN1B-206ENST00000638536 ELF3P78545 371 aaPredicted RBP18.39■□□□□ 0.53
SCN1B-206ENST00000638536 DEGS2Q6QHC5 323 aa18.39■□□□□ 0.53
SCN1B-206ENST00000638536 OR52H1Q8NGJ2 320 aa18.39■□□□□ 0.53
SCN1B-206ENST00000638536 GCM1Q9NP62 436 aa18.39■□□□□ 0.53
SCN1B-206ENST00000638536 MRM2Q9UI43 246 aaKnown RBP18.39■□□□□ 0.53
SCN1B-206ENST00000638536 IKZF2Q9UKS7 526 aa18.39■□□□□ 0.53
SCN1B-206ENST00000638536 TMEM14AQ9Y6G1 99 aa18.39■□□□□ 0.53
SCN1B-206ENST00000638536 A0A1W2PQL4 384 aaPredicted RBP18.38■□□□□ 0.53
SCN1B-206ENST00000638536 SRSF10O75494 262 aaKnown RBP18.38■□□□□ 0.53
SCN1B-206ENST00000638536 ZNF16P17020 682 aaPredicted RBP18.38■□□□□ 0.53
SCN1B-206ENST00000638536 PMELP40967 661 aa18.38■□□□□ 0.53
SCN1B-206ENST00000638536 MFGE8Q08431 387 aaPredicted RBP18.38■□□□□ 0.53
SCN1B-206ENST00000638536 SLC25A30Q5SVS4 291 aa18.38■□□□□ 0.53
SCN1B-206ENST00000638536 ASB17Q8WXJ9 295 aa18.38■□□□□ 0.53
SCN1B-206ENST00000638536 OR10A2Q9H208 303 aa18.38■□□□□ 0.53
SCN1B-206ENST00000638536 NIPAL2Q9H841 368 aa18.38■□□□□ 0.53
SCN1B-206ENST00000638536 NKX1-2Q9UD57 310 aaPredicted RBP18.38■□□□□ 0.53
SCN1B-206ENST00000638536 TMEM269A0A1B0GVZ9 245 aa18.38■□□□□ 0.53
SCN1B-206ENST00000638536 SLC16A6O15403 523 aa18.38■□□□□ 0.53
SCN1B-206ENST00000638536 GSK3AP49840 483 aa18.38■□□□□ 0.53
SCN1B-206ENST00000638536 CHN2P52757 468 aa18.38■□□□□ 0.53
SCN1B-206ENST00000638536 HOXA4Q00056 320 aaPredicted RBP18.38■□□□□ 0.53
SCN1B-206ENST00000638536 OCLNQ16625 522 aa18.38■□□□□ 0.53
SCN1B-206ENST00000638536 C6orf52Q5T4I8 152 aa18.38■□□□□ 0.53
SCN1B-206ENST00000638536 SIGLEC11Q96RL6 698 aa18.38■□□□□ 0.53
SCN1B-206ENST00000638536 YAE1D1Q9NRH1 226 aa18.38■□□□□ 0.53
SCN1B-206ENST00000638536 TMEM106BQ9NUM4 274 aa18.38■□□□□ 0.53
SCN1B-206ENST00000638536 SMPD3Q9NY59 655 aaPredicted RBP18.38■□□□□ 0.53
SCN1B-206ENST00000638536 PPP1R3CQ9UQK1 317 aa18.38■□□□□ 0.53
SCN1B-206ENST00000638536 CLDN25C9JDP6 229 aa18.37■□□□□ 0.53
SCN1B-206ENST00000638536 ZNF670-ZNF695F2Z2N8 137 aa18.37■□□□□ 0.53
SCN1B-206ENST00000638536 CLIC3O95833 236 aa18.37■□□□□ 0.53
SCN1B-206ENST00000638536 TNFRSF1AP19438 455 aa18.37■□□□□ 0.53
SCN1B-206ENST00000638536 ACKR3P25106 362 aa18.37■□□□□ 0.53
SCN1B-206ENST00000638536 RIDAP52758 137 aaKnown RBP18.37■□□□□ 0.53
SCN1B-206ENST00000638536 LMO4P61968 165 aa18.37■□□□□ 0.53
SCN1B-206ENST00000638536 PRAMEF6Q5VXH4 476 aa18.37■□□□□ 0.53
SCN1B-206ENST00000638536 CYB5R2Q6BCY4 276 aa18.37■□□□□ 0.53
SCN1B-206ENST00000638536 ZNF771Q7L3S4 317 aaPredicted RBP18.37■□□□□ 0.53
SCN1B-206ENST00000638536 OR10H4Q8NGA5 316 aa18.37■□□□□ 0.53
SCN1B-206ENST00000638536 RHOXF1Q8NHV9 184 aa18.37■□□□□ 0.53
SCN1B-206ENST00000638536 RFKQ969G6 155 aa18.37■□□□□ 0.53
SCN1B-206ENST00000638536 SP140LQ9H930 580 aa18.37■□□□□ 0.53
SCN1B-206ENST00000638536 LOC100289279A0A1B0GTE1 492 aa18.36■□□□□ 0.53
SCN1B-206ENST00000638536 FAM157AC9JC47 383 aa18.36■□□□□ 0.53
SCN1B-206ENST00000638536 ZNF254O75437 659 aa18.36■□□□□ 0.53
SCN1B-206ENST00000638536 HOXB4P17483 251 aaPredicted RBP18.36■□□□□ 0.53
SCN1B-206ENST00000638536 MTNR1AP48039 350 aa18.36■□□□□ 0.53
SCN1B-206ENST00000638536 MMP16P51512 607 aa18.36■□□□□ 0.53
SCN1B-206ENST00000638536 ZNF85Q03923 595 aa18.36■□□□□ 0.53
SCN1B-206ENST00000638536 OR8G1Q15617 311 aa18.36■□□□□ 0.53
SCN1B-206ENST00000638536 MPPED2Q15777 294 aa18.36■□□□□ 0.53
SCN1B-206ENST00000638536 ZNF684Q5T5D7 378 aa18.36■□□□□ 0.53
SCN1B-206ENST00000638536 MOGAT3Q86VF5 341 aa18.36■□□□□ 0.53
SCN1B-206ENST00000638536 APH1BQ8WW43 257 aa18.36■□□□□ 0.53
SCN1B-206ENST00000638536 RNFT2Q96EX2 444 aa18.36■□□□□ 0.53
SCN1B-206ENST00000638536 MNTQ99583 582 aa18.36■□□□□ 0.53
SCN1B-206ENST00000638536 PBOV1Q9GZY1 135 aa18.36■□□□□ 0.53
SCN1B-206ENST00000638536 AMBNQ9NP70 447 aa18.36■□□□□ 0.53
SCN1B-206ENST00000638536 MRPL15Q9P015 296 aaKnown RBP18.36■□□□□ 0.53
SCN1B-206ENST00000638536 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.36■□□□□ 0.53
SCN1B-206ENST00000638536 DOCK11Q5JSL3 2073 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms