RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ARPC2O15144 300 aa2.57□□□□□ -2
VIM-210ENST00000637053 P2RX6O15547 441 aa2.57□□□□□ -2
VIM-210ENST00000637053 CRXO43186 299 aaPredicted RBP2.57□□□□□ -2
VIM-210ENST00000637053 MSI1O43347 362 aaKnown RBP2.57□□□□□ -2
VIM-210ENST00000637053 HOXA3O43365 443 aaPredicted RBP2.57□□□□□ -2
VIM-210ENST00000637053 PRKNO60260 465 aaPredicted RBP2.57□□□□□ -2
VIM-210ENST00000637053 FAM189A1O60320 539 aa2.57□□□□□ -2
VIM-210ENST00000637053 CLDN11O75508 207 aa2.57□□□□□ -2
VIM-210ENST00000637053 FOXH1O75593 365 aa2.57□□□□□ -2
VIM-210ENST00000637053 LYPLA1O75608 230 aaPredicted RBP2.57□□□□□ -2
VIM-210ENST00000637053 RFPL2O75678 378 aa2.57□□□□□ -2
VIM-210ENST00000637053 ATG12O94817 140 aa2.57□□□□□ -2
VIM-210ENST00000637053 TOXO94900 526 aa2.57□□□□□ -2
VIM-210ENST00000637053 GCGP01275 180 aa2.57□□□□□ -2
VIM-210ENST00000637053 HPNP05981 417 aa2.57□□□□□ -2
VIM-210ENST00000637053 C8GP07360 202 aa2.57□□□□□ -2
VIM-210ENST00000637053 CSF3P09919 207 aa2.57□□□□□ -2
VIM-210ENST00000637053 OR8U8P0C7N1 319 aa2.57□□□□□ -2
VIM-210ENST00000637053 DUX4L2P0CJ85 424 aa2.57□□□□□ -2
VIM-210ENST00000637053 DUX4L3P0CJ86 424 aa2.57□□□□□ -2
VIM-210ENST00000637053 DUX4L5P0CJ88 424 aa2.57□□□□□ -2
VIM-210ENST00000637053 DUX4L6P0CJ89 424 aa2.57□□□□□ -2
VIM-210ENST00000637053 DUX4L7P0CJ90 424 aa2.57□□□□□ -2
VIM-210ENST00000637053 OR13C7P0DN81 318 aa2.57□□□□□ -2
VIM-210ENST00000637053 PRKACGP22612 351 aa2.57□□□□□ -2
VIM-210ENST00000637053 PYCR1P32322 319 aa2.57□□□□□ -2
VIM-210ENST00000637053 PIGAP37287 484 aa2.57□□□□□ -2
VIM-210ENST00000637053 MNDAP41218 407 aa2.57□□□□□ -2
VIM-210ENST00000637053 ZFP36L2P47974 494 aaKnown RBP2.57□□□□□ -2
VIM-210ENST00000637053 EVX1P49640 407 aa2.57□□□□□ -2
VIM-210ENST00000637053 EMDP50402 254 aa2.57□□□□□ -2
VIM-210ENST00000637053 DVL1P1P54792 670 aaPredicted RBP2.57□□□□□ -2
VIM-210ENST00000637053 MAXP61244 160 aa2.57□□□□□ -2
VIM-210ENST00000637053 PKIAP61925 76 aa2.57□□□□□ -2
VIM-210ENST00000637053 RHOBP62745 196 aa2.57□□□□□ -2
VIM-210ENST00000637053 ARG2P78540 354 aa2.57□□□□□ -2
VIM-210ENST00000637053 PSG4Q00888 419 aa2.57□□□□□ -2
VIM-210ENST00000637053 EMX1Q04741 257 aaPredicted RBP2.57□□□□□ -2
VIM-210ENST00000637053 FAM53BQ14153 422 aa2.57□□□□□ -2
VIM-210ENST00000637053 KIR2DS3Q14952 304 aa2.57□□□□□ -2
VIM-210ENST00000637053 SNRNP35Q16560 246 aaKnown RBP2.57□□□□□ -2
VIM-210ENST00000637053 HIST3H3Q16695 136 aa2.57□□□□□ -2
VIM-210ENST00000637053 DUOXA1Q1HG43 343 aa2.57□□□□□ -2
VIM-210ENST00000637053 HLA-DRB5Q30154 266 aa2.57□□□□□ -2
VIM-210ENST00000637053 ANXA2RQ3ZCQ2 193 aa2.57□□□□□ -2
VIM-210ENST00000637053 CDNFQ49AH0 187 aa2.57□□□□□ -2
VIM-210ENST00000637053 TMEM52BQ4KMG9 183 aa2.57□□□□□ -2
VIM-210ENST00000637053 ENTPD8Q5MY95 495 aa2.57□□□□□ -2
VIM-210ENST00000637053 TMEM78Q5T7P6 136 aa2.57□□□□□ -2
VIM-210ENST00000637053 HIST2H3PS2Q5TEC6 136 aa2.57□□□□□ -2
VIM-210ENST00000637053 FRG2Q64ET8 278 aa2.57□□□□□ -2
VIM-210ENST00000637053 DUX4L9Q6RFH8 374 aaPredicted RBP2.57□□□□□ -2
VIM-210ENST00000637053 PAMR1Q6UXH9 720 aa2.57□□□□□ -2
VIM-210ENST00000637053 TMPPEQ6ZT21 453 aa2.57□□□□□ -2
VIM-210ENST00000637053 C1QL2Q7Z5L3 287 aa2.57□□□□□ -2
VIM-210ENST00000637053 C5orf24Q7Z6I8 188 aa2.57□□□□□ -2
VIM-210ENST00000637053 DOLPP1Q86YN1 238 aa2.57□□□□□ -2
VIM-210ENST00000637053 DND1Q8IYX4 353 aaKnown RBP2.57□□□□□ -2
VIM-210ENST00000637053 OR2L13Q8N349 312 aa2.57□□□□□ -2
VIM-210ENST00000637053 LRTM2Q8N967 370 aa2.57□□□□□ -2
VIM-210ENST00000637053 DUSP18Q8NEJ0 188 aa2.57□□□□□ -2
VIM-210ENST00000637053 OR52E4Q8NGH9 312 aa2.57□□□□□ -2
VIM-210ENST00000637053 OR51S1Q8NGJ8 323 aa2.57□□□□□ -2
VIM-210ENST00000637053 OR6T1Q8NGN1 323 aa2.57□□□□□ -2
VIM-210ENST00000637053 OR4C13Q8NGP0 309 aa2.57□□□□□ -2
VIM-210ENST00000637053 OR13C4Q8NGS5 318 aa2.57□□□□□ -2
VIM-210ENST00000637053 OR8U1Q8NH10 309 aa2.57□□□□□ -2
VIM-210ENST00000637053 OR5B3Q8NH48 314 aa2.57□□□□□ -2
VIM-210ENST00000637053 OR4X1Q8NH49 305 aa2.57□□□□□ -2
VIM-210ENST00000637053 OR13C6PQ8NH95 151 aa2.57□□□□□ -2
VIM-210ENST00000637053 OR14A16Q8NHC5 309 aa2.57□□□□□ -2
VIM-210ENST00000637053 HMGCLL1Q8TB92 370 aa2.57□□□□□ -2
VIM-210ENST00000637053 SPPL2BQ8TCT7 592 aa2.57□□□□□ -2
VIM-210ENST00000637053 TBCKQ8TEA7 893 aa2.57□□□□□ -2
VIM-210ENST00000637053 DOK4Q8TEW6 326 aa2.57□□□□□ -2
VIM-210ENST00000637053 NAT14Q8WUY8 206 aa2.57□□□□□ -2
VIM-210ENST00000637053 TRUB1Q8WWH5 349 aaKnown RBP2.57□□□□□ -2
VIM-210ENST00000637053 NDRG1Q92597 394 aaKnown RBP2.57□□□□□ -2
VIM-210ENST00000637053 DYRK2Q92630 601 aa2.57□□□□□ -2
VIM-210ENST00000637053 TM4SF18Q96CE8 201 aa2.57□□□□□ -2
VIM-210ENST00000637053 MRAP2Q96G30 205 aa2.57□□□□□ -2
VIM-210ENST00000637053 PCED1BQ96HM7 432 aa2.57□□□□□ -2
VIM-210ENST00000637053 KAZALD1Q96I82 304 aa2.57□□□□□ -2
VIM-210ENST00000637053 CAPNS2Q96L46 248 aa2.57□□□□□ -2
VIM-210ENST00000637053 RCHY1Q96PM5 261 aa2.57□□□□□ -2
VIM-210ENST00000637053 KLF6Q99612 283 aaPredicted RBP2.57□□□□□ -2
VIM-210ENST00000637053 GINS3Q9BRX5 216 aa2.57□□□□□ -2
VIM-210ENST00000637053 TMEM121Q9BTD3 319 aa2.57□□□□□ -2
VIM-210ENST00000637053 DCTN5Q9BTE1 182 aa2.57□□□□□ -2
VIM-210ENST00000637053 NHEJ1Q9H9Q4 299 aaPredicted RBP2.57□□□□□ -2
VIM-210ENST00000637053 ZNF334Q9HCZ1 680 aaPredicted RBP2.57□□□□□ -2
VIM-210ENST00000637053 ENY2Q9NPA8 101 aa2.57□□□□□ -2
VIM-210ENST00000637053 ACOT13Q9NPJ3 140 aa2.57□□□□□ -2
VIM-210ENST00000637053 HRASLS2Q9NWW9 162 aa2.57□□□□□ -2
VIM-210ENST00000637053 RNF186Q9NXI6 227 aa2.57□□□□□ -2
VIM-210ENST00000637053 ELOVL5Q9NYP7 299 aa2.57□□□□□ -2
VIM-210ENST00000637053 DUX4Q9UBX2 424 aa2.57□□□□□ -2
VIM-210ENST00000637053 PLEKHB1Q9UF11 243 aaPredicted RBP2.57□□□□□ -2
VIM-210ENST00000637053 LGALS13Q9UHV8 139 aa2.57□□□□□ -2
VIM-210ENST00000637053 PILRBQ9UKJ0 227 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms