RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 E7ESA3 106 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 NPIPA7E9PJI5 369 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 H7C423 109 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 OR7A17O14581 309 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 TAPBPO15533 448 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 CDC40O60508 579 aaKnown RBP eCLIP1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 B4GALT2O60909 372 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 CTNSO60931 367 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 BANF1O75531 89 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 EPPINO95925 133 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 FGGP02679 453 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 HPNP05981 417 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 TPM1P09493 284 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 NPIPA8P0DM63 369 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 GABRA1P14867 456 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 SDC1P18827 310 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 CNR1P21554 472 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 CALB2P22676 271 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 ATP5A1P25705 553 aaKnown RBP1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 PTGDSP41222 190 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 SLCO1A2P46721 670 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 DNASE1L1P49184 302 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 FNTAP49354 379 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 CEBPDP49716 269 aaPredicted RBP1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 CCR8P51685 355 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 LIM2P55344 173 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 RAB8AP61006 207 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 SKP1P63208 163 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 BASP1P80723 227 aaKnown RBP1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 EWSR1Q01844 656 aaKnown RBP eCLIP1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 TNFRSF17Q02223 184 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 BDH1Q02338 343 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 OC90Q02509 493 aaPredicted RBP1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 RGS1Q08116 209 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 RIPPLY1Q0D2K3 151 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 COX10Q12887 443 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 GANABQ14697 944 aaKnown RBP1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 SLC10A1Q14973 349 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 ZMYND11Q15326 602 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 SPA17Q15506 151 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 EXOC3L2Q2M3D2 409 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 PIGGQ5H8A4 983 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF506Q5JVG8 444 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 CDKL4Q5MAI5 379 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 LGSNQ5TDP6 509 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 FAM71F2Q6NXP2 309 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 SYT10Q6XYQ8 523 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 HSDL2Q6YN16 418 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 RTL4Q6ZR62 310 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 KIAA1328Q86T90 577 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 IFNEQ86WN2 208 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 SYCE1Q8N0S2 351 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 ABHD12Q8N2K0 398 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 BPIFB2Q8N4F0 458 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 C15orf54Q8N8G6 183 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF615Q8N8J6 731 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 ZSCAN4Q8NAM6 433 aaPredicted RBP1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 BBOF1Q8ND07 529 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 MORN4Q8NDC4 146 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 BHLHE23Q8NDY6 225 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 C17orf47Q8NEP4 570 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 TTLQ8NG68 377 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 OR2L5Q8NG80 312 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 OR10G3Q8NGC4 313 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 MCOLN3Q8TDD5 553 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 SKA2Q8WVK7 121 aaPredicted RBP1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 ANKRD49Q8WVL7 239 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 IL1F10Q8WWZ1 152 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 PIGCQ92535 297 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 RPL3LQ92901 407 aaKnown RBP1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 SDSLQ96GA7 329 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 COQ2Q96H96 371 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 SH3YL1Q96HL8 342 aaPredicted RBP1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 TSNARE1Q96NA8 513 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 AMDHD1Q96NU7 426 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 ALS2CR12Q96Q35 445 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 ATOH8Q96SQ7 321 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 ANP32EQ9BTT0 268 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 MS4A8Q9BY19 250 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 DEFB126Q9BYW3 111 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 POPDC3Q9HBV1 291 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 MEPEQ9NQ76 525 aaPredicted RBP1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 EXOSC3Q9NQT5 275 aaKnown RBP1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 TAS2R13Q9NYV9 303 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 EHFQ9NZC4 300 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 BFARQ9NZS9 450 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 SENP1Q9P0U3 644 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 PIPOXQ9P0Z9 390 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 ZNF639Q9UID6 485 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 CLEC4AQ9UMR7 237 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 RNF24Q9Y225 148 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 C15orf41Q9Y2V0 281 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 OARD1Q9Y530 152 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 NBEAL2Q6ZNJ1 2754 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 CSMD3Q7Z407 3707 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 PCNX3Q9H6A9 2034 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 CADP27708 2225 aa1.93□□□□□ -2.1
SMARCB1-208ENST00000634926 FREM1Q5H8C1 2179 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 A0A0G2JN53 185 aa1.92□□□□□ -2.1
SMARCB1-208ENST00000634926 GOLGA8QA0A0J9YX86 632 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms