RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 TRAM1Q15629 374 aa12.24□□□□□ -0.45
PHACTR4-209ENST00000633371 ZMAT1Q5H9K5 638 aa12.24□□□□□ -0.45
PHACTR4-209ENST00000633371 C22orf42Q6IC83 251 aa12.24□□□□□ -0.45
PHACTR4-209ENST00000633371 ZNF544Q6NX49 715 aa12.24□□□□□ -0.45
PHACTR4-209ENST00000633371 CEACAM19Q7Z692 300 aa12.24□□□□□ -0.45
PHACTR4-209ENST00000633371 GPR148Q8TDV2 347 aa12.24□□□□□ -0.45
PHACTR4-209ENST00000633371 APOBEC3DQ96AK3 386 aaPredicted RBP12.24□□□□□ -0.45
PHACTR4-209ENST00000633371 C12orf43Q96C57 262 aaKnown RBP12.24□□□□□ -0.45
PHACTR4-209ENST00000633371 MED18Q9BUE0 208 aa12.24□□□□□ -0.45
PHACTR4-209ENST00000633371 REPIN1Q9BWE0 567 aaKnown RBP12.24□□□□□ -0.45
PHACTR4-209ENST00000633371 COMMD4Q9H0A8 199 aa12.24□□□□□ -0.45
PHACTR4-209ENST00000633371 PTTG3PQ9NZH4 202 aa12.24□□□□□ -0.45
PHACTR4-209ENST00000633371 NDUFA13Q9P0J0 144 aa12.24□□□□□ -0.45
PHACTR4-209ENST00000633371 HHLA2Q9UM44 414 aa12.24□□□□□ -0.45
PHACTR4-209ENST00000633371 V9GYS6 101 aa12.24□□□□□ -0.45
PHACTR4-209ENST00000633371 ROS1P08922 2347 aa12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 NKX6-1P78426 367 aaPredicted RBP12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 FAM3AP98173 230 aa12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 GK2Q14410 553 aaPredicted RBP12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 GFOD2Q3B7J2 385 aa12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 Q499Y3 187 aa12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 GDPGP1Q6ZNW5 385 aa12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 ACBD4Q8NC06 268 aa12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 ZNF420Q8TAQ5 688 aaPredicted RBP12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 DGCR14Q96DF8 476 aaKnown RBP12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 ADAT3Q96EY9 351 aaPredicted RBP12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 REEP6Q96HR9 211 aa12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 FAM71F1Q96KD3 344 aaPredicted RBP12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 MOV10Q9HCE1 1003 aaKnown RBP12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 EXOSC4Q9NPD3 245 aaKnown RBP12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 NOX4Q9NPH5 578 aa12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 SSR3Q9UNL2 185 aa12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 ANKHD1Q8IWZ3 2542 aaKnown RBP12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 DOPEY1Q5JWR5 2465 aa12.23□□□□□ -0.45
PHACTR4-209ENST00000633371 TRAV8-7A0A075B6U6 113 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 LOC390937A0A1W2PQ73 354 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 A6NIN4 97 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 ATP6V1G2-DDX39BF2Z307 99 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 SYT7O43581 403 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 GATBO75879 557 aaKnown RBP12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 CLEC2LP0C7M8 214 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 GSK3AP49840 483 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 PPP1CBP62140 327 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 BSPH1Q075Z2 132 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 OR8B8Q15620 311 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 SPATA46Q5T0L3 261 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 NCMAPQ5T1S8 102 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 DOK3Q7L591 496 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 DMRTC2Q8IXT2 367 aaPredicted RBP12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 NDNFQ8TB73 568 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 SLC25A40Q8TBP6 338 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 RAB2BQ8WUD1 216 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 FGGYQ96C11 551 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 MARS2Q96GW9 593 aaKnown RBP12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 GFI1Q99684 422 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 SLC30A2Q9BRI3 323 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 FAM192AQ9GZU8 254 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 PPP1R3EQ9H7J1 279 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 SP140LQ9H930 580 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 ZNF275Q9NSD4 429 aaPredicted RBP12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 RSL24D1Q9UHA3 163 aaKnown RBP12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 ABCA4P78363 2273 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 MYO18BQ8IUG5 2567 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 ADGRG4Q8IZF6 3080 aa12.22□□□□□ -0.45
PHACTR4-209ENST00000633371 A0A1B0GVI7 797 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 DEFB108AA8MXU0 73 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 ZNF701M0R085 212 aaPredicted RBP12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 XRCC2O43543 280 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 LILRA1O75019 489 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 OCM2P0CE71 109 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 IGFBP3P17936 291 aaPredicted RBP12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 MPV17P39210 176 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 ALKBH6Q3KRA9 238 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 CEP78Q5JTW2 689 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 FBXW12Q6X9E4 464 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 KRT74Q7RTS7 529 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 SSX8Q7RTT4 187 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 LRRTM1Q86UE6 522 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 NR2C2APQ86WQ0 139 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 PARP16Q8N5Y8 322 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 OR1J1Q8NGS3 322 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 OR13C3Q8NGS6 347 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 LRRC46Q96FV0 321 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 BCL7BQ9BQE9 202 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 OR2J1Q9GZK6 312 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 RGCCQ9H4X1 137 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 EIF3KQ9UBQ5 218 aaKnown RBP12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 NDRG3Q9UGV2 375 aa12.21□□□□□ -0.45
PHACTR4-209ENST00000633371 CCDC160A6NGH7 325 aa12.2□□□□□ -0.46
PHACTR4-209ENST00000633371 TUBAL3A6NHL2 446 aa12.2□□□□□ -0.46
PHACTR4-209ENST00000633371 SHISA9B4DS77 424 aa12.2□□□□□ -0.46
PHACTR4-209ENST00000633371 J3QW42 95 aa12.2□□□□□ -0.46
PHACTR4-209ENST00000633371 DHRS3O75911 302 aa12.2□□□□□ -0.46
PHACTR4-209ENST00000633371 PLAUP00749 431 aa12.2□□□□□ -0.46
PHACTR4-209ENST00000633371 SERPINA3P01011 423 aa12.2□□□□□ -0.46
PHACTR4-209ENST00000633371 FAHP16930 419 aa12.2□□□□□ -0.46
PHACTR4-209ENST00000633371 ADRA2CP18825 462 aa12.2□□□□□ -0.46
PHACTR4-209ENST00000633371 PTAFRP25105 342 aa12.2□□□□□ -0.46
PHACTR4-209ENST00000633371 TIMM50Q3ZCQ8 353 aa12.2□□□□□ -0.46
PHACTR4-209ENST00000633371 ZNF529Q6P280 563 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms