RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ROBO4Q8WZ75 1007 aa17.33■□□□□ 0.37
PCDHB11-202ENST00000624887 AQP3Q92482 292 aa17.33■□□□□ 0.37
PCDHB11-202ENST00000624887 FAM46BQ96A09 425 aa17.33■□□□□ 0.37
PCDHB11-202ENST00000624887 FAM173AQ9BQD7 235 aa17.33■□□□□ 0.37
PCDHB11-202ENST00000624887 SEC22CQ9BRL7 303 aa17.33■□□□□ 0.37
PCDHB11-202ENST00000624887 GINS4Q9BRT9 223 aa17.33■□□□□ 0.37
PCDHB11-202ENST00000624887 ZNF107Q9UII5 783 aaPredicted RBP17.33■□□□□ 0.37
PCDHB11-202ENST00000624887 A0A0U1RQV5 110 aa17.33■□□□□ 0.36
PCDHB11-202ENST00000624887 SNRPGP15A8MWD9 76 aa17.33■□□□□ 0.36
PCDHB11-202ENST00000624887 CPN1P15169 458 aa17.33■□□□□ 0.36
PCDHB11-202ENST00000624887 CASRP41180 1078 aa17.33■□□□□ 0.36
PCDHB11-202ENST00000624887 GFOD2Q3B7J2 385 aa17.33■□□□□ 0.36
PCDHB11-202ENST00000624887 ZNF260Q3ZCT1 412 aa17.33■□□□□ 0.36
PCDHB11-202ENST00000624887 AWAT2Q6E213 333 aa17.33■□□□□ 0.36
PCDHB11-202ENST00000624887 OR51S1Q8NGJ8 323 aa17.33■□□□□ 0.36
PCDHB11-202ENST00000624887 OR8S1Q8NH09 359 aa17.33■□□□□ 0.36
PCDHB11-202ENST00000624887 NKD1Q969G9 470 aa17.33■□□□□ 0.36
PCDHB11-202ENST00000624887 FBXO17Q96EF6 278 aa17.33■□□□□ 0.36
PCDHB11-202ENST00000624887 LYZL4Q96KX0 146 aa17.33■□□□□ 0.36
PCDHB11-202ENST00000624887 ZMAT3Q9HA38 289 aaKnown RBP17.33■□□□□ 0.36
PCDHB11-202ENST00000624887 GPN1Q9HCN4 374 aaPredicted RBP17.33■□□□□ 0.36
PCDHB11-202ENST00000624887 C5orf63A6NC05 138 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 TMEM14DPA8MWL7 114 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 LINC01387J3KSC0 135 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 SCGNO76038 276 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 APOC1P02654 83 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 ZNF626Q68DY1 528 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 PIP4P1Q86T03 277 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 GPR137CQ8N3F9 429 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 C9orf62Q8N4C0 152 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 OR2M7Q8NG81 312 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 DVL3Q92997 716 aaPredicted RBP17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 CPNE4Q96A23 557 aaPredicted RBP17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 SIGLEC12Q96PQ1 595 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 DLL4Q9NR61 685 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 PLEK2Q9NYT0 353 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 ABI3Q9P2A4 366 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 ELF5Q9UKW6 265 aaPredicted RBP17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 HSPB11Q9Y547 144 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 FREM2Q5SZK8 3169 aa17.32■□□□□ 0.36
PCDHB11-202ENST00000624887 CACNA1HO95180 2353 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 TMEM235A6NFC5 223 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 WIPF3A6NGB9 483 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 CREBL2O60519 120 aaPredicted RBP17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 SLC6A9P48067 706 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 AAED1Q7RTV5 226 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 CPT1CQ8TCG5 803 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 NUDT16L1Q9BRJ7 211 aaKnown RBP17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 ZNF436Q9C0F3 470 aaPredicted RBP17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 CRLF2Q9HC73 371 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 KNTC1P50748 2209 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 M0R135 149 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 AKR7A2O43488 359 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 CYTIPO60759 359 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 TNFSF15O95150 251 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 FCER2P06734 321 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 GSK3AP49840 483 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 TRIP6Q15654 476 aaKnown RBP17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 Q6ZSR3 168 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 SLC36A1Q7Z2H8 476 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 RNF144BQ7Z419 303 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 SPICQ8N5J4 248 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 SSC4DQ8WTU2 575 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 ZNF799Q96GE5 643 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 SPACA5Q96QH8 159 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 PRRX2Q99811 253 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 SCP2D1Q9UJQ7 156 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 MGAT4AQ9UM21 535 aa17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 MRPS28Q9Y2Q9 187 aaKnown RBP17.31■□□□□ 0.36
PCDHB11-202ENST00000624887 ZNF780AO75290 641 aaPredicted RBP17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 RAB3DO95716 219 aa17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 CYB5AP00167 134 aa17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 MELTFP08582 738 aa17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 CST2P09228 141 aa17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 ITGA3P26006 1051 aa17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 AIMP2Q13155 320 aaKnown RBP17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 OR2W3Q7Z3T1 314 aa17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 GLRX5Q86SX6 157 aa17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 MEIOBQ8N635 442 aa17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 OR11H4Q8NGC9 324 aa17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 ZNF431Q8TF32 576 aaPredicted RBP17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 SPTSSAQ969W0 71 aa17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 IP6K3Q96PC2 410 aa17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 ZNF703Q9H7S9 590 aaPredicted RBP17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 TMEM38BQ9NVV0 291 aa17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 ZNF69Q9UC07 566 aa17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 KLK13Q9UKR3 277 aa17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 V9GYS6 101 aa17.3■□□□□ 0.36
PCDHB11-202ENST00000624887 IGKV1-9A0A0C4DH69 117 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 STMND1H3BQB6 276 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 DHRS3O75911 302 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 CD74P04233 296 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 HCKP08631 526 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 VSIG10L2P0DP72 767 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 SNRPD2P62316 118 aaKnown RBP17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 ECH1Q13011 328 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 HYAL4Q2M3T9 481 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 PDSS1Q5T2R2 415 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 RIPPLY2Q5TAB7 128 aa17.29■□□□□ 0.36
PCDHB11-202ENST00000624887 GLIPR1L1Q6UWM5 242 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms