RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 TSPO2Q5TGU0 170 aa14.33□□□□□ -0.12
LDB3-208ENST00000623007 ZNF100Q8IYN0 542 aa14.33□□□□□ -0.12
LDB3-208ENST00000623007 IZUMO1Q8IYV9 350 aa14.33□□□□□ -0.12
LDB3-208ENST00000623007 DTX3Q8N9I9 347 aa14.33□□□□□ -0.12
LDB3-208ENST00000623007 FDCSPQ8NFU4 85 aa14.33□□□□□ -0.12
LDB3-208ENST00000623007 OR52N4Q8NGI2 321 aa14.33□□□□□ -0.12
LDB3-208ENST00000623007 OR6F1Q8NGZ6 308 aa14.33□□□□□ -0.12
LDB3-208ENST00000623007 NANOS1Q8WY41 292 aaKnown RBP14.33□□□□□ -0.12
LDB3-208ENST00000623007 PRDM14Q9GZV8 571 aa14.33□□□□□ -0.12
LDB3-208ENST00000623007 CST11Q9H112 138 aa14.33□□□□□ -0.12
LDB3-208ENST00000623007 OPA3Q9H6K4 179 aa14.33□□□□□ -0.12
LDB3-208ENST00000623007 ING3Q9NXR8 418 aa14.33□□□□□ -0.12
LDB3-208ENST00000623007 CGGBP1Q9UFW8 167 aaPredicted RBP14.33□□□□□ -0.12
LDB3-208ENST00000623007 TRAV18A0A075B6X5 111 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 SLC2A1P11166 492 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 PSMB1P20618 241 aaKnown RBP14.32□□□□□ -0.12
LDB3-208ENST00000623007 NTF4P34130 210 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 BTCP35070 178 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 RCVRNP35243 200 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 HTR5AP47898 357 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 SRP9P49458 86 aaKnown RBP14.32□□□□□ -0.12
LDB3-208ENST00000623007 RIPPLY1Q0D2K3 151 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 CLN3Q13286 438 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 CNN3Q15417 329 aaKnown RBP14.32□□□□□ -0.12
LDB3-208ENST00000623007 AWAT2Q6E213 333 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 TUSC5Q8IXB3 177 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 SEMA6DQ8NFY4 1073 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 FNDC9Q8TBE3 224 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 UBASH3BQ8TF42 649 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 SLC7A6Q92536 515 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 ZNF775Q96BV0 537 aaPredicted RBP14.32□□□□□ -0.12
LDB3-208ENST00000623007 WDYHV1Q96HA8 205 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 GMPPAQ96IJ6 420 aaPredicted RBP14.32□□□□□ -0.12
LDB3-208ENST00000623007 URM1Q9BTM9 101 aaKnown RBP14.32□□□□□ -0.12
LDB3-208ENST00000623007 AUNIPQ9H7T9 357 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 HRASLSQ9HDD0 168 aa14.32□□□□□ -0.12
LDB3-208ENST00000623007 DMDP11532 3685 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 PHF3Q92576 2039 aaKnown RBP14.31□□□□□ -0.12
LDB3-208ENST00000623007 C7orf66A4D0T2 115 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 SLC22A20A6NK97 555 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 PRKACBP22694 351 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 GIFP27352 417 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 TAS2R19P59542 299 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 PSG4Q00888 419 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 PMPCAQ10713 525 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 CAMK2BQ13554 666 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 RTL6Q6ICC9 239 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 TMEM53Q6P2H8 277 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 IGFL3Q6UXB1 125 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 ANGPTL5Q86XS5 388 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 CCDC36Q8IYA8 594 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 ZADH2Q8N4Q0 377 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 OR4D6Q8NGJ1 314 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 SARAFQ96BY9 339 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 ZNF837Q96EG3 531 aaPredicted RBP14.31□□□□□ -0.12
LDB3-208ENST00000623007 CALHM2Q9HA72 323 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 SLC7A10Q9NS82 523 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 NUDT15Q9NV35 164 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 RHBDD3Q9Y3P4 386 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 N6AMT1Q9Y5N5 214 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 WDR87Q6ZQQ6 2873 aa14.31□□□□□ -0.12
LDB3-208ENST00000623007 AQP7O14520 342 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 CNOT4O95628 575 aaKnown RBP14.3□□□□□ -0.12
LDB3-208ENST00000623007 H2AFB2P0C5Z0 115 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 AKAIN1P0CW23 69 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 RRAS2P62070 204 aaPredicted RBP14.3□□□□□ -0.12
LDB3-208ENST00000623007 GPX8Q8TED1 209 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 SLC39A7Q92504 469 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 GPER1Q99527 375 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 S100A13Q99584 98 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 DLL3Q9NYJ7 618 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 ZNF319Q9P2F9 582 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 MRPS28Q9Y2Q9 187 aaKnown RBP14.3□□□□□ -0.12
LDB3-208ENST00000623007 ALG5Q9Y673 324 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 TMEM14DPA8MWL7 114 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 LMX1BO60663 402 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 PEX14O75381 377 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 LCATP04180 440 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 SERPINA5P05154 406 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 MELTFP08582 738 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 MMP7P09237 267 aaPredicted RBP14.3□□□□□ -0.12
LDB3-208ENST00000623007 ABOP16442 354 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 PLP2Q04941 152 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 RSPO1Q2MKA7 263 aaPredicted RBP14.3□□□□□ -0.12
LDB3-208ENST00000623007 PCGF3Q3KNV8 242 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 TBRG1Q3YBR2 411 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 ZNF774Q6NX45 483 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 SKA3Q8IX90 412 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 ZNF101Q8IZC7 436 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 OR5AS1Q8N127 324 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 TMEM229BQ8NBD8 167 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 STEAP2Q8NFT2 490 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 SSC4DQ8WTU2 575 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 MED30Q96HR3 178 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 REEP6Q96HR9 211 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 WNT5BQ9H1J7 359 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 DEFB127Q9H1M4 99 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 PCDHB16Q9NRJ7 776 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 KLK11Q9UBX7 282 aa14.3□□□□□ -0.12
LDB3-208ENST00000623007 PIGLQ9Y2B2 252 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms