RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 RFKQ969G6 155 aa11.82□□□□□ -0.52
PCDHGC3-208ENST00000622836 SOX7Q9BT81 388 aa11.82□□□□□ -0.52
PCDHGC3-208ENST00000622836 ADAT1Q9BUB4 502 aaKnown RBP11.82□□□□□ -0.52
PCDHGC3-208ENST00000622836 SLC22A4Q9H015 551 aa11.82□□□□□ -0.52
PCDHGC3-208ENST00000622836 UBAP1Q9NZ09 502 aa11.82□□□□□ -0.52
PCDHGC3-208ENST00000622836 WARS2Q9UGM6 360 aaKnown RBP11.82□□□□□ -0.52
PCDHGC3-208ENST00000622836 ZFHX3Q15911 3703 aa11.82□□□□□ -0.52
PCDHGC3-208ENST00000622836 YLPM1P49750 1951 aaKnown RBP11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 LRRC30A6NM36 301 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 ZNF670-ZNF695F2Z2N8 137 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 PHYHO14832 338 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 SBK2P0C263 348 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 HOXB4P17483 251 aaPredicted RBP11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 CXCR4P61073 352 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 POU4F2Q12837 409 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 DEGS2Q6QHC5 323 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 MOGAT3Q86VF5 341 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 SPSB4Q96A44 273 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 SGK3Q96BR1 496 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 RAB39BQ96DA2 213 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 OR8B4Q96RC9 309 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 MNTQ99583 582 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 RGCCQ9H4X1 137 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 ZNF665Q9H7R5 613 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 LPAR2Q9HBW0 351 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 ADGRL4Q9HBW9 690 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 GCM1Q9NP62 436 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 MRPL15Q9P015 296 aaKnown RBP11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 PCDHB10Q9UN67 800 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 COPS3Q9UNS2 423 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 NPTNQ9Y639 398 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 NAV3Q8IVL0 2385 aa11.81□□□□□ -0.52
PCDHGC3-208ENST00000622836 DYSFO75923 2080 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 TMEM269A0A1B0GVZ9 245 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 B4DSR2 109 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 IFNL4K9M1U5 179 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 GMDSO60547 372 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 ZNF254O75437 659 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 CRLF1O75462 422 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 IRF2P14316 349 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 HTR1FP30939 366 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 DDOSTP39656 456 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 MMP16P51512 607 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 RIDAP52758 137 aaKnown RBP11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 FAM3AP98173 230 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 MZT1Q08AG7 82 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 HNRNPA0Q13151 305 aaKnown RBP11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 ZSCAN26Q16670 478 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 ZNF829Q3KNS6 432 aaPredicted RBP11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 CHRFAM7AQ494W8 412 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 ZNF322Q6U7Q0 402 aaPredicted RBP11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 PRSS45Q7RTY3 260 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 COMMD2Q86X83 199 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 ZNF679Q8IYX0 411 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 FTMTQ8N4E7 242 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 ZNF420Q8TAQ5 688 aaPredicted RBP11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 TRUB1Q8WWH5 349 aaKnown RBP11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 DVL3Q92997 716 aaPredicted RBP11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 POM121Q96HA1 1249 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 HRASLS5Q96KN8 279 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 TBX5Q99593 518 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 BEX2Q9BXY8 128 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 SHARPINQ9H0F6 387 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 CLN6Q9NWW5 311 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 DCAF16Q9NXF7 216 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 HAO2Q9NYQ3 351 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 GTF2A1LQ9UNN4 478 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 GMPPBQ9Y5P6 360 aa11.8□□□□□ -0.52
PCDHGC3-208ENST00000622836 MALRD1Q5VYJ5 2156 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 hCG_38984A0A1B0GV85 526 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 FAM157AC9JC47 383 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 ANKRD65E5RJM6 399 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 APOL3O95236 402 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 ANPEPP15144 967 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 RBMXP38159 391 aaKnown RBP11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 GNALP38405 381 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 GSK3AP49840 483 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 BTG1P62324 171 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 ROM1Q03395 351 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 PRAMEF6Q5VXH4 476 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 GLCCI1Q86VQ1 547 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 C1orf87Q8N0U7 546 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 RFLNBQ8N5W9 214 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 OR10H4Q8NGA5 316 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 OR8B12Q8NGG6 310 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 OR11L1Q8NGX0 322 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 OR8S1Q8NH09 359 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 UBE2FQ969M7 185 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 MBOAT4Q96T53 435 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 SLC29A1Q99808 456 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 PAPOLGQ9BWT3 736 aaKnown RBP11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 UFSP2Q9NUQ7 469 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 ZNF319Q9P2F9 582 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 CDC42EP3Q9UKI2 254 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 TANC2Q9HCD6 1990 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 JMJD1CQ15652 2540 aa11.79□□□□□ -0.52
PCDHGC3-208ENST00000622836 A6NLC8 198 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms