RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 GALNT16Q8N428 558 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 BHLHE23Q8NDY6 225 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 SECTM1Q8WVN6 248 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 ASB5Q8WWX0 329 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 MARC2Q969Z3 335 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 SLC25A38Q96DW6 304 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 CHST6Q9GZX3 395 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 RPS10P5Q9NQ39 176 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 C1orf123Q9NWV4 160 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 MDC1Q14676 2089 aaKnown RBP11.48□□□□□ -0.57
MSH6-215ENST00000622629 ANGPTL7O43827 346 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 BCKDHBP21953 392 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 LINC00696Q6ZRV3 163 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 OR11G2Q8NGC1 345 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 LRRC46Q96FV0 321 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 CALHM2Q9HA72 323 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 ZNF286AQ9HBT8 521 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 FSCN3Q9NQT6 498 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 LEUTXA8MZ59 168 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 BPNT1O95861 308 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 ASAH2BP0C7U1 165 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 PRSS12P56730 875 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 PPP1R1AQ13522 171 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 SIGIRRQ6IA17 410 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 MKXQ8IYA7 352 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 SEMA6DQ8NFY4 1073 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 CADM4Q8NFZ8 388 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 OR11H4Q8NGC9 324 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 OR2I1PQ8NGU4 316 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 IFI44Q8TCB0 444 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 SCGB1C1Q8TD33 95 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 DHRS9Q9BPW9 319 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 AIFM2Q9BRQ8 373 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 IER2Q9BTL4 223 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 TMEM231Q9H6L2 316 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 MYOTQ9UBF9 498 aa11.48□□□□□ -0.57
MSH6-215ENST00000622629 NOTCH4Q99466 2003 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 LINC00271P0C7V0 271 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 MGMTP16455 207 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 PCBD1P61457 104 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 RPS18P62269 152 aaKnown RBP11.47□□□□□ -0.57
MSH6-215ENST00000622629 INSM1Q01101 510 aaPredicted RBP11.47□□□□□ -0.57
MSH6-215ENST00000622629 GGTLC2Q14390 218 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 ZNF574Q6ZN55 896 aaPredicted RBP11.47□□□□□ -0.57
MSH6-215ENST00000622629 CDH26Q8IXH8 852 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 SPICQ8N5J4 248 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 CCDC54Q8NEL0 328 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 RRNAD1Q96FB5 475 aaKnown RBP11.47□□□□□ -0.57
MSH6-215ENST00000622629 MOB1AQ9H8S9 216 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 MCTS1Q9ULC4 181 aaKnown RBP11.47□□□□□ -0.57
MSH6-215ENST00000622629 TCRBV16S1A1N1A0A5B0 115 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 BGLAPP02818 100 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 SERPINE2P07093 398 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 ZNF728P0DKX0 622 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 Q5BKY6 102 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 CMTM1Q8IZ96 169 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 SUMF1Q8NBK3 374 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 HSD17B11Q8NBQ5 300 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 LIPHQ8WWY8 451 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 SLAMF9Q96A28 289 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 ZNF2Q9BSG1 426 aaPredicted RBP11.47□□□□□ -0.57
MSH6-215ENST00000622629 C12orf10Q9HB07 376 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 ZNF275Q9NSD4 429 aaPredicted RBP11.47□□□□□ -0.57
MSH6-215ENST00000622629 DHHO43323 396 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 CXCL13O43927 109 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 RFC3P40938 356 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 KIR3DL2P43630 455 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 GAS1P54826 345 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 SUMO3P55854 103 aaPredicted RBP11.47□□□□□ -0.57
MSH6-215ENST00000622629 RIN1Q13671 783 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 ZNF684Q5T5D7 378 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 ANKRD37Q7Z713 158 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 TERB2Q8NHR7 220 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 GPR179Q6PRD1 2367 aa11.47□□□□□ -0.57
MSH6-215ENST00000622629 IGKV1D-42A0A075B6H8 117 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 RFPL4AA6NLU0 287 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 RFPL4AL1F8VTS6 287 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 TGFBR3LH3BV60 316 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 TK1P04183 234 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 IL32P24001 234 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 DCAF12Q5T6F0 453 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 RTL6Q6ICC9 239 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 ZNF611Q8N823 705 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 NOXO1Q8NFA2 376 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 ZNF721Q8TF20 911 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 VOPP1Q96AW1 172 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 ALKBH3Q96Q83 286 aaPredicted RBP11.46□□□□□ -0.57
MSH6-215ENST00000622629 OPN4Q9UHM6 478 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 NOSIPQ9Y314 301 aaKnown RBP11.46□□□□□ -0.57
MSH6-215ENST00000622629 VAMP5O95183 116 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 ABHD16AO95870 558 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 IFNA5P01569 189 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 TAGLNQ01995 201 aaKnown RBP11.46□□□□□ -0.57
MSH6-215ENST00000622629 CPT1CQ8TCG5 803 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 RSPO3Q9BXY4 272 aaPredicted RBP11.46□□□□□ -0.57
MSH6-215ENST00000622629 KCNJ16Q9NPI9 418 aa11.46□□□□□ -0.57
MSH6-215ENST00000622629 UPK3AO75631 287 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 PNPP00491 289 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 SNRNP70P08621 437 aaKnown RBP11.46□□□□□ -0.58
MSH6-215ENST00000622629 ADRA2CP18825 462 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms