RNA–Protein interactions for RNA: ENST00000622565.4

LTBP4-239, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-239ENST00000622565 INTS14Q96SY0 518 aa16.12■□□□□ 0.17
LTBP4-239ENST00000622565 SSBP3Q9BWW4 388 aaPredicted RBP16.12■□□□□ 0.17
LTBP4-239ENST00000622565 OR51V1Q9H2C8 321 aa16.12■□□□□ 0.17
LTBP4-239ENST00000622565 PPP1R3EQ9H7J1 279 aa16.12■□□□□ 0.17
LTBP4-239ENST00000622565 ZNF69Q9UC07 566 aa16.12■□□□□ 0.17
LTBP4-239ENST00000622565 TCRBV3S1A0A5B6 114 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 GNGT2O14610 69 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 GYG2O15488 501 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 CX3CR1P49238 355 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 BLVRAP53004 296 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 CDK5Q00535 292 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 FLOT2Q14254 428 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 KLHL12Q53G59 568 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 PLBD1Q6P4A8 553 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 ZNF841Q6ZN19 808 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 SPATA24Q86W54 205 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 C1orf87Q8N0U7 546 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 ERGIC1Q969X5 290 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 SGK3Q96BR1 496 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 ZMYND19Q96E35 227 aaPredicted RBP16.11■□□□□ 0.17
LTBP4-239ENST00000622565 NEIL1Q96FI4 390 aaPredicted RBP16.11■□□□□ 0.17
LTBP4-239ENST00000622565 SUCNR1Q9BXA5 334 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 NTN4Q9HB63 628 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 MRPL15Q9P015 296 aaKnown RBP16.11■□□□□ 0.17
LTBP4-239ENST00000622565 MIOXQ9UGB7 285 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 OR5V1Q9UGF6 321 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 POMPQ9Y244 141 aa16.11■□□□□ 0.17
LTBP4-239ENST00000622565 SOX21Q9Y651 276 aaPredicted RBP16.11■□□□□ 0.17
LTBP4-239ENST00000622565 TBX1O43435 398 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 GMDSO60547 372 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 SELENOFO60613 162 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 FKBP6O75344 327 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 OSMP13725 252 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 OPRL1P41146 370 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 CBX1P83916 185 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 FAM3AP98173 230 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 DNAL1Q4LDG9 190 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 TMEM236Q5W0B7 351 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 ZNF826PQ6ZT77 177 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 SLC16A9Q7RTY1 509 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 WDR86Q86TI4 376 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 BPIFB2Q8N4F0 458 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 PAPD5Q8NDF8 572 aaKnown RBP16.1■□□□□ 0.17
LTBP4-239ENST00000622565 BBS1Q8NFJ9 593 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 ZNF48Q96MX3 618 aaPredicted RBP16.1■□□□□ 0.17
LTBP4-239ENST00000622565 SLC22A4Q9H015 551 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 DNAJC27Q9NZQ0 273 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 CTSZQ9UBR2 303 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 NUP50Q9UKX7 468 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 KLHDC2Q9Y2U9 406 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 TENM1Q9UKZ4 2725 aa16.1■□□□□ 0.17
LTBP4-239ENST00000622565 IGHV3OR16-10A0A075B7F0 116 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 IGHV2-70DA0A0C4DH43 119 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 XRCC2O43543 280 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 ANXA2P07355 339 aaKnown RBP16.09■□□□□ 0.17
LTBP4-239ENST00000622565 IGHV4-38-2P0DP08 117 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 IRF2P14316 349 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 PITPNBP48739 271 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 ZNF121P58317 390 aaPredicted RBP16.09■□□□□ 0.17
LTBP4-239ENST00000622565 GNB2P62879 340 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 GRB2P62993 217 aaKnown RBP16.09■□□□□ 0.17
LTBP4-239ENST00000622565 ARMCX4Q5H9R4 360 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 SFRP4Q6FHJ7 346 aaPredicted RBP16.09■□□□□ 0.17
LTBP4-239ENST00000622565 DCDC5Q6ZRR9 648 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 FAM57BQ71RH2 274 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 SIGLECL1Q8N7X8 197 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 BOLLQ8N9W6 283 aaKnown RBP16.09■□□□□ 0.17
LTBP4-239ENST00000622565 OR8B3Q8NGG8 313 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 OR11L1Q8NGX0 322 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 FAM216AQ8WUB2 273 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 RAB40AQ8WXH6 277 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 OR8B2Q96RD0 313 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 MRI1Q9BV20 369 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 FN3KRPQ9HA64 309 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 C1orf123Q9NWV4 160 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 RNF7Q9UBF6 113 aa16.09■□□□□ 0.17
LTBP4-239ENST00000622565 hCG_38984A0A1B0GV85 526 aa16.08■□□□□ 0.16
LTBP4-239ENST00000622565 PRR23D1E9PI22 279 aaPredicted RBP16.08■□□□□ 0.16
LTBP4-239ENST00000622565 TRIM77I1YAP6 450 aa16.08■□□□□ 0.16
LTBP4-239ENST00000622565 TNFRSF13BO14836 293 aaPredicted RBP16.08■□□□□ 0.16
LTBP4-239ENST00000622565 E2F6O75461 281 aa16.08■□□□□ 0.16
LTBP4-239ENST00000622565 FCN3O75636 299 aa16.08■□□□□ 0.16
LTBP4-239ENST00000622565 GRPP07492 148 aa16.08■□□□□ 0.16
LTBP4-239ENST00000622565 PRR23D2P0DMB1 279 aaPredicted RBP16.08■□□□□ 0.16
LTBP4-239ENST00000622565 CPT2P23786 658 aa16.08■□□□□ 0.16
LTBP4-239ENST00000622565 HSD11B1P28845 292 aa16.08■□□□□ 0.16
LTBP4-239ENST00000622565 PSMB10P40306 273 aa16.08■□□□□ 0.16
LTBP4-239ENST00000622565 SLC15A1P46059 708 aa16.08■□□□□ 0.16
LTBP4-239ENST00000622565 WDR25Q64LD2 544 aaPredicted RBP16.08■□□□□ 0.16
LTBP4-239ENST00000622565 CPOQ8IVL8 374 aa16.08■□□□□ 0.16
LTBP4-239ENST00000622565 C11orf53Q8IXP5 236 aa16.08■□□□□ 0.16
LTBP4-239ENST00000622565 REEP6Q96HR9 211 aa16.08■□□□□ 0.16
LTBP4-239ENST00000622565 C1orf147Q96MC9 270 aaPredicted RBP16.08■□□□□ 0.16
LTBP4-239ENST00000622565 CADM1Q9BY67 442 aaKnown RBP16.08■□□□□ 0.16
LTBP4-239ENST00000622565 TOR3AQ9H497 397 aa16.08■□□□□ 0.16
LTBP4-239ENST00000622565 BRD7Q9NPI1 651 aa16.08■□□□□ 0.16
LTBP4-239ENST00000622565 DNAJB9Q9UBS3 223 aa16.08■□□□□ 0.16
LTBP4-239ENST00000622565 KIR2DS1A0A191URI9 304 aa16.07■□□□□ 0.16
LTBP4-239ENST00000622565 C22orf46C9J442 243 aa16.07■□□□□ 0.16
LTBP4-239ENST00000622565 C3orf80F5H4A9 247 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms