RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 A0A0U1RQV5 110 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 TRIM64A6NGJ6 449 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 GGT3PA6NGU5 568 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 OR4C45A6NMZ5 311 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 TIMM8AO60220 97 aaPredicted RBP13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 TNFAIP8O95379 198 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 CD8AP01732 235 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 CFL1P23528 166 aaKnown RBP13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 ALDH3B1P43353 468 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 EVX1P49640 407 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 CCR9P51686 369 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 FAM3AP98173 230 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 DOC2BQ14184 412 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 SPHARQ15513 63 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 MED22Q15528 200 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 SWI5Q1ZZU3 235 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 CCDC58Q4VC31 144 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 RPL22L1Q6P5R6 122 aaKnown RBP13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 DTX2Q86UW9 622 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 RDH10Q8IZV5 341 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 SPARTQ8N0X7 666 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 OR5AS1Q8N127 324 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 ZFP41Q8N8Y5 198 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 FAM71F1Q96KD3 344 aaPredicted RBP13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 TRAF4Q9BUZ4 470 aaPredicted RBP13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 TRIM36Q9NQ86 728 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 ST6GALNAC2Q9UJ37 374 aa13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 LSM2Q9Y333 95 aaKnown RBP13.37□□□□□ -0.27
PCDHGC3-204ENST00000617222 TRBV2A0A0J9YWF9 115 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 A0A1B0GTI1 187 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 hCG_38984A0A1B0GV85 526 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 CD300LBA8K4G0 201 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 H3BSH0 61 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 OGG1O15527 345 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 IGLV3-1P01715 115 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 SELEP16581 610 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 KITLGP21583 273 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 GSK3AP49840 483 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 EMX1Q04741 257 aaPredicted RBP13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 MOGQ16653 247 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 NKPD1Q17RQ9 610 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 ZNF773Q6PK81 442 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 SVOPQ8N4V2 548 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 ZNF676Q8N7Q3 588 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 NR1H4Q96RI1 486 aaPredicted RBP13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 OPA3Q9H6K4 179 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 ACOT13Q9NPJ3 140 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 ZNF391Q9UJN7 358 aa13.36□□□□□ -0.27
PCDHGC3-204ENST00000617222 BAHCC1Q9P281 2608 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 A0A1B0GVI7 797 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 SYT7O43581 403 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 HSMCR30P0CW71 290 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 TAS2R43P59537 309 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 SNRPD2P62316 118 aaKnown RBP13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 SLC3A1Q07837 685 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 TNK1Q13470 666 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 CDK5R1Q15078 307 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 TBCEQ15813 527 aaPredicted RBP13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 TMEM244Q5VVB8 128 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 C11orf71Q6IPW1 123 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 BHLHE23Q8NDY6 225 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 TSPAN14Q8NG11 270 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 OR56B2PQ8NGI1 322 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 OR5AK2Q8NH90 309 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 GTF3AQ92664 365 aaKnown RBP13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 PDCD1LG2Q9BQ51 273 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 ZNF696Q9H7X3 374 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 GPR160Q9UJ42 338 aa13.35□□□□□ -0.27
PCDHGC3-204ENST00000617222 AKAP6Q13023 2319 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 PNMA8CA0A1B0GUJ8 204 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 TMEM212A6NML5 194 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 IQCF6A8MYZ5 107 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 M0R233 179 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 LILRA1O75019 489 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 ZFPL1O95159 310 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 UBCP0CG48 685 aaKnown RBP13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 NAT2P11245 290 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 CELP19835 753 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 ACKR3P25106 362 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 ACSM1Q08AH1 577 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 DMKNQ6E0U4 476 aaPredicted RBP13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 PAMR1Q6UXH9 720 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 DOK3Q7L591 496 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 OR8G5Q8NG78 346 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 OR14K1Q8NGZ2 314 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 RPS4Y2Q8TD47 263 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 CCL19Q99731 98 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 COMMD4Q9H0A8 199 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 MSL2Q9HCI7 577 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 DYNLRB1Q9NP97 96 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 PLEKHA6Q9Y2H5 1048 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 PMF1-BGLAPU3KQ54 211 aa13.34□□□□□ -0.27
PCDHGC3-204ENST00000617222 A0A087WXM4 84 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 LOC107986453A0A1B0GWG9 222 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 PLSCR5A0PG75 271 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 MTRF1O75570 445 aaKnown RBP13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 ISG15P05161 165 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 BMP4P12644 408 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 ATP6V1B1P15313 513 aa13.33□□□□□ -0.28
PCDHGC3-204ENST00000617222 CD53P19397 219 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms