RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 ENTPD1P49961 510 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 PRKXP51817 358 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 SLC25A1P53007 311 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 GYS2P54840 703 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 BPIFB3P59826 476 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 MXRA7P84157 204 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 PPP1R8Q12972 351 aaKnown RBP6.33□□□□□ -1.4
CUX1-219ENST00000606749 CRMP1Q14194 572 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 TAF13Q15543 124 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 OR8B8Q15620 311 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 KCNJ8Q15842 424 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 MICAQ29983 383 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 DEFB112Q30KQ8 113 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 PRR31Q5SQ13 230 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 CD276Q5ZPR3 534 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 BRD3OSQ6XYD6 125 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 BOLLQ8N9W6 283 aaKnown RBP6.33□□□□□ -1.4
CUX1-219ENST00000606749 SPERTQ8NA61 448 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 AQP11Q8NBQ7 271 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 OR4Q3Q8NH05 313 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 SPSB4Q96A44 273 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 SLAMF6Q96DU3 332 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 COPS4Q9BT78 406 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 ADAT1Q9BUB4 502 aaKnown RBP6.33□□□□□ -1.4
CUX1-219ENST00000606749 NMNAT2Q9BZQ4 307 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 RASSF4Q9H2L5 321 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 UNKLQ9H9P5 680 aaKnown RBP6.33□□□□□ -1.4
CUX1-219ENST00000606749 ERVK-18Q9QC07 812 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 CTSZQ9UBR2 303 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 BAIAP2Q9UQB8 552 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 N6AMT1Q9Y5N5 214 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 COMMD3-BMI1R4GMX3 469 aa6.33□□□□□ -1.4
CUX1-219ENST00000606749 TRAV38-1A0A0B4J264 116 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 OOEPA6NGQ2 149 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 B2RBV5 119 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 HOXA3O43365 443 aaPredicted RBP6.32□□□□□ -1.4
CUX1-219ENST00000606749 ADAM20O43506 726 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 WIPF1O43516 503 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 NDUFA2O43678 99 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 FCN3O75636 299 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 DCTN3O75935 186 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 TOX4O94842 621 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 GYPAP02724 150 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 SFTPBP07988 381 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 MMP9P14780 707 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 SPI1P17947 270 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 CFHR2P36980 270 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 DDOSTP39656 456 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 MNAT1P51948 309 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 BLVRAP53004 296 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 GNGT1P63211 74 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 FAM3AP98173 230 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 MS4A2Q01362 244 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 MZT1Q08AG7 82 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 POU4F2Q12837 409 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 LINC01590Q5TEZ4 76 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 GPR157Q5UAW9 335 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 OR2T5Q6IEZ7 315 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 Q6YL49 198 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 ZNF826PQ6ZT77 177 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 SPATC1Q76KD6 591 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 DHFR2Q86XF0 187 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 C11orf53Q8IXP5 236 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 OR2T33Q8NG76 320 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 OR56B2PQ8NGI1 322 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 OR2T29Q8NH02 315 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 ZDHHC16Q969W1 377 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 TMIGD2Q96BF3 282 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 SGK3Q96BR1 496 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 NSL1Q96IY1 281 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 TECTBQ96PL2 329 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 PCGF1Q9BSM1 259 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 DGCR6LQ9BY27 220 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 MMADHCQ9H3L0 296 aaPredicted RBP6.32□□□□□ -1.4
CUX1-219ENST00000606749 OPA3Q9H6K4 179 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 MAGIXQ9H6Y5 334 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 SMURF1Q9HCE7 757 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 TRIM36Q9NQ86 728 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 TBC1D23Q9NUY8 699 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 ARMC1Q9NVT9 282 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 C1orf123Q9NWV4 160 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 VNN3Q9NY84 501 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 SAMHD1Q9Y3Z3 626 aaKnown RBP6.32□□□□□ -1.4
CUX1-219ENST00000606749 U3KQV3 271 aa6.32□□□□□ -1.4
CUX1-219ENST00000606749 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.31□□□□□ -1.4
CUX1-219ENST00000606749 CENPVL3A0A0U1RRI6 287 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 DHRS12A0PJE2 317 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 FAM181BA6NEQ2 426 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 A6NLC8 198 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 ANKRD30BLA7E2S9 258 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 SRRM5B3KS81 715 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 ZNF879B4DU55 563 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 ZNF878C9JN71 531 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 P2RY10O00398 339 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 TBX1O43435 398 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 XRCC2O43543 280 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 SOX14O95416 240 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 MDKP21741 143 aaPredicted RBP6.31□□□□□ -1.4
CUX1-219ENST00000606749 OMGP23515 440 aa6.31□□□□□ -1.4
CUX1-219ENST00000606749 SLC15A1P46059 708 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms